Gene VIBHAR_01878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01878 
Symbol 
ID5555358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand+ 
Start bp1891785 
End bp1892375 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content43% 
IMG OID640907367 
Producthypothetical protein 
Protein accessionYP_001445072 
Protein GI156974165 
COG category[L] Replication, recombination and repair 
COG ID[COG2818] 3-methyladenine DNA glycosylase 
TIGRFAM ID[TIGR00624] DNA-3-methyladenine glycosylase I 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACAAA ATACGTGTGC ATGGGCGATG AACCATCCAC TTGAGCGTGA ATATCATGAT 
GCAGAGTGGG GTGTACCCGT TTATGACGAT AACGTGTTGT TTGAGTTCAT CACGTTAGAA 
GGCGCGCAAG CCGGTTTAAG TTGGATTACG ATTTTGAAAA AGCGAGAAGG CTATCGCCAA 
GCATTCGAAA ACTATGACTT AGATAAGCTC ATTCAACGTG ATGAAGTACG TACTGAGTTC 
ATCGTAGAAA ACTTCGACGT GGTTAAGCAC CGTGGCAAAA TTAACTCGGT ATTTAGCAAC 
GCTAAAGCGG CAAAGCAATT AATCGAAGAA TACGGCAGCC TATCTAATGC TCTATGGCAG 
TTTGTTGATG GCAAACCTAT AGTGAATCAT TGGACAGACA TGAGCCAAGT GCCAGTCTCC 
ACGGAACAGT CCAAAGCAAT GAGTAAGTTC CTTAAAAAGA AAGGCTTTAA ATTTGTGGGT 
GAGACGATCT GCTATGCCTT CATGCAAGCA GTCGGTATGG TCGATGACCA TATGGTAAGT 
TGCCCGAAAA AAACAACTGA TCGGTTTTGC TTATTGAATA GCGAATGTTG A
 
Protein sequence
MEQNTCAWAM NHPLEREYHD AEWGVPVYDD NVLFEFITLE GAQAGLSWIT ILKKREGYRQ 
AFENYDLDKL IQRDEVRTEF IVENFDVVKH RGKINSVFSN AKAAKQLIEE YGSLSNALWQ 
FVDGKPIVNH WTDMSQVPVS TEQSKAMSKF LKKKGFKFVG ETICYAFMQA VGMVDDHMVS 
CPKKTTDRFC LLNSEC