Gene VIBHAR_01872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01872 
Symbol 
ID5554307 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand+ 
Start bp1885038 
End bp1885709 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content44% 
IMG OID640907361 
Producthypothetical protein 
Protein accessionYP_001445066 
Protein GI156974159 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1842] Phage shock protein A (IM30), suppresses sigma54-dependent transcription 
TIGRFAM ID[TIGR02977] phage shock protein A 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTATTT TTTCTCGTTT TGCAGATATC GTTAACTCAA ACATCAGTGC ATTGCTAGAC 
AAGGCGGAAG ATCCTGAAAA AATGATCCGT CTTATCATCC AAGAAATGGA AGACACACTT 
GTAGAAGTGC GTACTAACTC GGCGAAAGCG ATTGCAGACA AAAAAGAGTT GGCTCGCAAA 
GTCGAAGCAC TAGAAGAGCA AATCACTGAG TGGGGCCAAA AAGCAAGCCT AGCACTCGTG 
AAAGAGCGTG AAGATTTGGC GCGTGCTGCT CTGATTGAAA AGCAAAAGCT AGAGCAAGTG 
ATTAAAGGTC TTCACACTGA ACAAACACTT GTAGAAGAAA CGATCGAGAA GCTAACAGGC 
GAAATCGGTA AGTTAGAAGC AAAAATCACG GAAACTCGTG CGAAGCAACA AGCGCTAGCA 
ATTCGTAACC AAACGGCATC TAACCGTCGT GATGTACAAA AGCAGCTACA TGCAGGTCGC 
ACAAACGAAG CGATGGCAAA GTTTGAGCAA TACTCTCGTA AGATTGACGA GATGGAAGCA 
GAAGCAGACC TATACGCGAA AACAGGCAAC GCAAAGTCAC TAGACCAAGA GTTTGCCGAG 
CTACAAGCAC AAGACGAAAT TGAAAAAGAG TTGGCAAAAC TGAAAGAACA GATGTCATCG 
AACGATAAAT AA
 
Protein sequence
MGIFSRFADI VNSNISALLD KAEDPEKMIR LIIQEMEDTL VEVRTNSAKA IADKKELARK 
VEALEEQITE WGQKASLALV KEREDLARAA LIEKQKLEQV IKGLHTEQTL VEETIEKLTG 
EIGKLEAKIT ETRAKQQALA IRNQTASNRR DVQKQLHAGR TNEAMAKFEQ YSRKIDEMEA 
EADLYAKTGN AKSLDQEFAE LQAQDEIEKE LAKLKEQMSS NDK