Gene VIBHAR_01870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01870 
Symbol 
ID5555515 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp1881892 
End bp1883511 
Gene Length1620 bp 
Protein Length539 aa 
Translation table11 
GC content46% 
IMG OID640907359 
Producthypothetical protein 
Protein accessionYP_001445064 
Protein GI156974157 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0747] ABC-type dipeptide transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGCTT TTATAAGACT ATCGCTGAGC CTGATTGGTA TTAGCTTACT CACCGCATGT 
GGTGATGAAA TCGATCACAA TGATATTCGA GAGAATGGCT TTGTGTTTTG CGGGCAAGGT
AAGCCAACCA CGTTTAATCC TCAGCTCATT GACAGCGGCA TCACTGCCGA AGCACTTAGC
CCTCAGCTAT ACGATACGCT GCTCACACTT GATCCCAAAA CCCATCAACC CGTTGCAAAT
CTTGCAGAAA ATTGGTCCGT TAATGAAGAA GGCACCGAAT ACACGTTTAA TCTTAAACAG
GGTGTTCAGT TTCAAAAGAC AGCATGGTTT ACACCTACAC GACCTTTTAA TGCACAAGAT
GTGGTATTCA GCTTCAAGCG AATCATTGAT GTAGACCATC CGTTTCACGA CGTCGGTGGT
GGTTTTTATC CATGGTTTGC AGGTTTAGAT TTCCAAAACT TGGTGAAAGA TGTTGTTGCT
GTGGATAACG ACACAGTGAA GTTTGTGCTC TCTCAACCTA ATTTTGCCTT TCTAGCCAAT
ATTGCGACCA GTCATGCCGT GCTACTTTCT GCCGAATATG GCCAGCAACT CGCAGTAAAA
GATGAGAAAG AACAGATCGA TATGTTACCT ATCGGTACAG GTCCCTACCA ACTAAAAGAG
TACCAAGTGA ACGACTTGAT TCGTCTTGAG CGCCATCCTA AATATTGGAA GTCACCAGCC
AAGATGGAAC AGGTGGTGTT CGACATTTCT CACCGCGGTA CTGGCACGCT CGCTAAGCTG
TTAAGAAACG AGTGTGATGT GCTTGCATCA CCAATTTCAA GTCAGATTCC AATCATTCAA
GAAACGGAAG AGCTAGAGTT AACCGCAACG CCTGCTAATA ACGTCTCATT TATCGCGATT
AACACTGAAC ACCCAGCTCT GCGCGATGCT CGTGTTCGCC AAGCATTGAA CCTAGCGATC
AACCGCCAGA ACATTCTTGA TTCAGTGTAT TACGGCACTG GCACTCAAGC TTACACCCTA
CTTCCACCTA ACTCTTGGGC TTACCAAAAA GACAGCGTGA AAATACGTTA TGACCGTAAT
TATGCTCTAG CCCTTCTTCG AGAGGCGGGT TACGAGAAAG GTCTGCAACT GACTATGTGG
GTGCCATTGG AACCACGCGC CTTTAACCCA AGTCCGCGTA AGACCGCAGA GCTGATTCAA
GCAAACTTCG CAGACATTGG CGTCGAGTTA CGACTGCTGA CTGATGACCG CTTTGAACGT
ACCCAACTGG AAAACATCAA TGATGTAGAC TTGCTGCTCA CTGGTTGGAT TGGGGATACG
GGCGATCCGG ATAACTTCTT CCGCCCTCTG CTGTCTTGTG AATCAGAACG CGTTGGTTTG
AATGTTTCGA TGTGGTGTAA CGATGATTTC GACTTCTTGT TGGATCTTGC ACTAGAAACT
CAACAGCAAC GTTACCGCTT GAACCTATAT CGCCAGGCGC AGAATATTCT CAATGAAGAA
TTCCCAGTTA TTCCATTGGC TCACGGCGTT CAATTCCGTG TCCACGACAA ATCGCTGAAA
GGTTTTAAAT CGAGCCCTTT CAATGCACAA CCTTTTGATA GAGTTGAGAG AATCCATTAA
 
Protein sequence
MKAFIRLSLS LIGISLLTAC GDEIDHNDIR ENGFVFCGQG KPTTFNPQLI DSGITAEALS 
PQLYDTLLTL DPKTHQPVAN LAENWSVNEE GTEYTFNLKQ GVQFQKTAWF TPTRPFNAQD
VVFSFKRIID VDHPFHDVGG GFYPWFAGLD FQNLVKDVVA VDNDTVKFVL SQPNFAFLAN
IATSHAVLLS AEYGQQLAVK DEKEQIDMLP IGTGPYQLKE YQVNDLIRLE RHPKYWKSPA
KMEQVVFDIS HRGTGTLAKL LRNECDVLAS PISSQIPIIQ ETEELELTAT PANNVSFIAI
NTEHPALRDA RVRQALNLAI NRQNILDSVY YGTGTQAYTL LPPNSWAYQK DSVKIRYDRN
YALALLREAG YEKGLQLTMW VPLEPRAFNP SPRKTAELIQ ANFADIGVEL RLLTDDRFER
TQLENINDVD LLLTGWIGDT GDPDNFFRPL LSCESERVGL NVSMWCNDDF DFLLDLALET
QQQRYRLNLY RQAQNILNEE FPVIPLAHGV QFRVHDKSLK GFKSSPFNAQ PFDRVERIH