Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_01870 |
Symbol | |
ID | 5555515 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | - |
Start bp | 1881892 |
End bp | 1883511 |
Gene Length | 1620 bp |
Protein Length | 539 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640907359 |
Product | hypothetical protein |
Protein accession | YP_001445064 |
Protein GI | 156974157 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGCTT TTATAAGACT ATCGCTGAGC CTGATTGGTA TTAGCTTACT CACCGCATGT GGTGATGAAA TCGATCACAA TGATATTCGA GAGAATGGCT TTGTGTTTTG CGGGCAAGGT AAGCCAACCA CGTTTAATCC TCAGCTCATT GACAGCGGCA TCACTGCCGA AGCACTTAGC CCTCAGCTAT ACGATACGCT GCTCACACTT GATCCCAAAA CCCATCAACC CGTTGCAAAT CTTGCAGAAA ATTGGTCCGT TAATGAAGAA GGCACCGAAT ACACGTTTAA TCTTAAACAG GGTGTTCAGT TTCAAAAGAC AGCATGGTTT ACACCTACAC GACCTTTTAA TGCACAAGAT GTGGTATTCA GCTTCAAGCG AATCATTGAT GTAGACCATC CGTTTCACGA CGTCGGTGGT GGTTTTTATC CATGGTTTGC AGGTTTAGAT TTCCAAAACT TGGTGAAAGA TGTTGTTGCT GTGGATAACG ACACAGTGAA GTTTGTGCTC TCTCAACCTA ATTTTGCCTT TCTAGCCAAT ATTGCGACCA GTCATGCCGT GCTACTTTCT GCCGAATATG GCCAGCAACT CGCAGTAAAA GATGAGAAAG AACAGATCGA TATGTTACCT ATCGGTACAG GTCCCTACCA ACTAAAAGAG TACCAAGTGA ACGACTTGAT TCGTCTTGAG CGCCATCCTA AATATTGGAA GTCACCAGCC AAGATGGAAC AGGTGGTGTT CGACATTTCT CACCGCGGTA CTGGCACGCT CGCTAAGCTG TTAAGAAACG AGTGTGATGT GCTTGCATCA CCAATTTCAA GTCAGATTCC AATCATTCAA GAAACGGAAG AGCTAGAGTT AACCGCAACG CCTGCTAATA ACGTCTCATT TATCGCGATT AACACTGAAC ACCCAGCTCT GCGCGATGCT CGTGTTCGCC AAGCATTGAA CCTAGCGATC AACCGCCAGA ACATTCTTGA TTCAGTGTAT TACGGCACTG GCACTCAAGC TTACACCCTA CTTCCACCTA ACTCTTGGGC TTACCAAAAA GACAGCGTGA AAATACGTTA TGACCGTAAT TATGCTCTAG CCCTTCTTCG AGAGGCGGGT TACGAGAAAG GTCTGCAACT GACTATGTGG GTGCCATTGG AACCACGCGC CTTTAACCCA AGTCCGCGTA AGACCGCAGA GCTGATTCAA GCAAACTTCG CAGACATTGG CGTCGAGTTA CGACTGCTGA CTGATGACCG CTTTGAACGT ACCCAACTGG AAAACATCAA TGATGTAGAC TTGCTGCTCA CTGGTTGGAT TGGGGATACG GGCGATCCGG ATAACTTCTT CCGCCCTCTG CTGTCTTGTG AATCAGAACG CGTTGGTTTG AATGTTTCGA TGTGGTGTAA CGATGATTTC GACTTCTTGT TGGATCTTGC ACTAGAAACT CAACAGCAAC GTTACCGCTT GAACCTATAT CGCCAGGCGC AGAATATTCT CAATGAAGAA TTCCCAGTTA TTCCATTGGC TCACGGCGTT CAATTCCGTG TCCACGACAA ATCGCTGAAA GGTTTTAAAT CGAGCCCTTT CAATGCACAA CCTTTTGATA GAGTTGAGAG AATCCATTAA
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Protein sequence | MKAFIRLSLS LIGISLLTAC GDEIDHNDIR ENGFVFCGQG KPTTFNPQLI DSGITAEALS PQLYDTLLTL DPKTHQPVAN LAENWSVNEE GTEYTFNLKQ GVQFQKTAWF TPTRPFNAQD VVFSFKRIID VDHPFHDVGG GFYPWFAGLD FQNLVKDVVA VDNDTVKFVL SQPNFAFLAN IATSHAVLLS AEYGQQLAVK DEKEQIDMLP IGTGPYQLKE YQVNDLIRLE RHPKYWKSPA KMEQVVFDIS HRGTGTLAKL LRNECDVLAS PISSQIPIIQ ETEELELTAT PANNVSFIAI NTEHPALRDA RVRQALNLAI NRQNILDSVY YGTGTQAYTL LPPNSWAYQK DSVKIRYDRN YALALLREAG YEKGLQLTMW VPLEPRAFNP SPRKTAELIQ ANFADIGVEL RLLTDDRFER TQLENINDVD LLLTGWIGDT GDPDNFFRPL LSCESERVGL NVSMWCNDDF DFLLDLALET QQQRYRLNLY RQAQNILNEE FPVIPLAHGV QFRVHDKSLK GFKSSPFNAQ PFDRVERIH
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