Gene VIBHAR_01868 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01868 
Symbol 
ID5553825 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp1880056 
End bp1880943 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content48% 
IMG OID640907357 
Producthypothetical protein 
Protein accessionYP_001445062 
Protein GI156974155 
COG category[V] Defense mechanisms 
COG ID[COG4171] ABC-type antimicrobial peptide transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTAACAA ATAACGTTTA TCAGGAAGAA CGCATTCCAA CTCAGTTCGA ACGATTCTGG 
CGTAGCTACC GTGCCAACAG CTTGGCAATG TTTGGCTTGT GGTGTCTGAT TTTCATCATC
CTGATCACCA TATTTGCGCC ATTCCTTACG CCTTATGATC CACAAGCTCA ATCGGGCGAA
CTACTTGTGC CTCCATCATG GGCACCAGCA GGCGCCGTGG ACTACTTTCT TGGCACAGAC
GACTTGGGTC GTGACATCCT TTCGCGTCTG ATTATGGGTT CTCAGCTGAC ATTCGGTGCA
GCCGTCGCCA TAACAGTCAT TGCTGGTTTG ATTGGCTGTT TTATTGGTGT TTTGGCAGGT
ATGACTAAAG GTCTGTTATC GAGTACTTTG AACCACTTAC TCGATACCGT AATGTCGATC
CCATCGCTAC TACTGGCGAT CATCTTCGTG GCTTTCCTTG GCTTTGGTGA GTTCAACATC
CTTCTGGCTA TCTGCTTGGC TTTGATTCCA CGCTTTATTC GCTCGGTGTA CATCGCGGTC
CATACGGAAG TAGAAAAAGA CTACATCATG GCGGCTCGCC TAGATGGTGC CAATGACTTC
TACTTACTGT GGAACTCGAT TCTGCCAAAC GTACTCACTG TCATCGCGGC AGAAATCACA
CTGGCACTAT CTGTAGCAAT TTTAGATATC ACAGCACTAG GCTTCCTTGG TTTGGGTGCT
CAAGCACCAA GTACTGAATG GGGCGCAATC CTTGGCGACT CCGTTGAGCT GATTTACATT
GCGCCATGGA CAGTAACACT ACCAGGTCTC ACCATTATGT TTACCGTGGT TGTTCTAAAC
TTAGTGGGTG AAGGTGTACG CCAAGCTCTC AATGCGGGGA TCGAATAA
 
Protein sequence
MLTNNVYQEE RIPTQFERFW RSYRANSLAM FGLWCLIFII LITIFAPFLT PYDPQAQSGE 
LLVPPSWAPA GAVDYFLGTD DLGRDILSRL IMGSQLTFGA AVAITVIAGL IGCFIGVLAG
MTKGLLSSTL NHLLDTVMSI PSLLLAIIFV AFLGFGEFNI LLAICLALIP RFIRSVYIAV
HTEVEKDYIM AARLDGANDF YLLWNSILPN VLTVIAAEIT LALSVAILDI TALGFLGLGA
QAPSTEWGAI LGDSVELIYI APWTVTLPGL TIMFTVVVLN LVGEGVRQAL NAGIE