Gene VIBHAR_01866 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01866 
Symbol 
ID5555142 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp1878282 
End bp1879064 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content48% 
IMG OID640907355 
Producthypothetical protein 
Protein accessionYP_001445060 
Protein GI156974153 
COG category[V] Defense mechanisms 
COG ID[COG4167] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGCGT TGCTTGAAGT CGATAACCTA TCGAAACAGT TTGTCACGCG CTCAGGTCTG 
TTTAAACGCA TAGTCAAAGA AGCGGTTAAA CCGGTTAGTT TTACCCTAGA GCCGGGTCAA
ACCATTGGCT TTATTGGCCA AAACGGCTCA GGAAAGTCTA CGCTAGCACG TATGTTAGCG
GGTGTGGTTG AGCCAAGTTC CGGTGAGATT CGTGTAAACG GTGAGCGCCT TGAACACGAA
GATTACTCGA CGCGTTGTAA GCTAATTCGC ATGATTTTCC AAGATCCAAA CACCTCTTTG
AACCCGCGCA TTCAGATTGG CCGCATTTTG GAAGGTCCAT TAAAACGAAA CACCAACATG
CCGCCAGATG CACGTATGAA GCGTGTAAAA GATACTCTGT TGCGCGTAGG TCTGCTGCCA
GAGCATGCTT ATTTCTATCC GCAAATGCTT GCAGCAGGTC AGAAGCAGCG TGTATGTCTT
GCTCGTGCTC TTATCCTGCA ACCTTCCATC ATCGTTGCTG ATGAGGCACT AAACGGTCTA
GACATGGCGA TGCGCTCTCA GATCATCAAC TTATTCTTAG AGTTGCAAGA AGAGATGGGC
TTGTCGTTTG TTTACGTGTC TCAGCATATT GGCATCGTGA AACACATTAC CGACAAAGTA
ATGGTGATGC ATGAAGGCGA AGTGGTGGAG TTCGGCGAAA CAAACCAAGT GCTGACCAAC
CCAGAGCATG CGATTACTCA GCGATTGGTA GAGAGCCACT TCTACAAAGC GCCAAACCAC
TAA
 
Protein sequence
MSALLEVDNL SKQFVTRSGL FKRIVKEAVK PVSFTLEPGQ TIGFIGQNGS GKSTLARMLA 
GVVEPSSGEI RVNGERLEHE DYSTRCKLIR MIFQDPNTSL NPRIQIGRIL EGPLKRNTNM
PPDARMKRVK DTLLRVGLLP EHAYFYPQML AAGQKQRVCL ARALILQPSI IVADEALNGL
DMAMRSQIIN LFLELQEEMG LSFVYVSQHI GIVKHITDKV MVMHEGEVVE FGETNQVLTN
PEHAITQRLV ESHFYKAPNH