Gene VIBHAR_01846 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01846 
Symbol 
ID5555061 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp1859800 
End bp1860543 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content49% 
IMG OID640907336 
ProductRNA-directed DNA polymerase 
Protein accessionYP_001445041 
Protein GI156974134 
COG category[L] Replication, recombination and repair 
COG ID[COG3344] Retron-type reverse transcriptase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGGGATCC CTCAGCCACA GGGTGGTCCA TTATCTCCGT TGCTATCCAA TATCGTATTA 
GATGAACTGG ATAAAGAGCT AGAGCGTAGA GGGCATAAGT TCTGTCGATA TGCAGACGAC
TGTCAAATCT ATGTTGGTAG TGAGGAAGCC GCTTATCGAG TGAAAGAGTC GATAACGGAG
TACTTGGAGC AAAAACTGAA ACTCACGGTA AACCGAGAGA AAAGTGCAGC AACAAGAGTG
ACAGAGCGAA CTTACCTAAG CCACCGCTTC GGGATAGATG GGACAATCCA TATATCGAAG
CCAGCGCAAA CTCAAATGAA GACGCGAGTG CGGCAGATAA CGAAGCGAAA CCGAGGTCGA
GAGTTAAAGG TGGTAATCGC CGAGTTAACT CAATACCTAA GAGGTTGGCA AGACTACTTC
AAACTCGCCA TACGGAAGAG CAGCATGAAG CGCTTGGACG AATGGATACG GCGACGGCTA
AGATGCTATC GACTTAAGCA ACGCAAACAC AGATACGGCA TAGCGACATG GTTACAGCGA
CAAGGTGTAA CAGAGCGTAA TGCGTGGAAG TTAGCGATGT CAGATAAAGG TTGGTGGCGG
CTAGCATTAA CGCCCCAGAC AAATCACGCT ATGCCAACAA AATGGTTCGA GGAGTTGGGT
CTGTACTCGT TGCGAGATGG GTATGAGTCA CTAAAAGTAT ATTCGGAACC GCCGTATGCG
ACCCACGCTT GTACGGTGGT GTGA
 
Protein sequence
MGIPQPQGGP LSPLLSNIVL DELDKELERR GHKFCRYADD CQIYVGSEEA AYRVKESITE 
YLEQKLKLTV NREKSAATRV TERTYLSHRF GIDGTIHISK PAQTQMKTRV RQITKRNRGR
ELKVVIAELT QYLRGWQDYF KLAIRKSSMK RLDEWIRRRL RCYRLKQRKH RYGIATWLQR
QGVTERNAWK LAMSDKGWWR LALTPQTNHA MPTKWFEELG LYSLRDGYES LKVYSEPPYA
THACTVV