Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_01846 |
Symbol | |
ID | 5555061 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | + |
Start bp | 1859800 |
End bp | 1860543 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640907336 |
Product | RNA-directed DNA polymerase |
Protein accession | YP_001445041 |
Protein GI | 156974134 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3344] Retron-type reverse transcriptase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGGGATCC CTCAGCCACA GGGTGGTCCA TTATCTCCGT TGCTATCCAA TATCGTATTA GATGAACTGG ATAAAGAGCT AGAGCGTAGA GGGCATAAGT TCTGTCGATA TGCAGACGAC TGTCAAATCT ATGTTGGTAG TGAGGAAGCC GCTTATCGAG TGAAAGAGTC GATAACGGAG TACTTGGAGC AAAAACTGAA ACTCACGGTA AACCGAGAGA AAAGTGCAGC AACAAGAGTG ACAGAGCGAA CTTACCTAAG CCACCGCTTC GGGATAGATG GGACAATCCA TATATCGAAG CCAGCGCAAA CTCAAATGAA GACGCGAGTG CGGCAGATAA CGAAGCGAAA CCGAGGTCGA GAGTTAAAGG TGGTAATCGC CGAGTTAACT CAATACCTAA GAGGTTGGCA AGACTACTTC AAACTCGCCA TACGGAAGAG CAGCATGAAG CGCTTGGACG AATGGATACG GCGACGGCTA AGATGCTATC GACTTAAGCA ACGCAAACAC AGATACGGCA TAGCGACATG GTTACAGCGA CAAGGTGTAA CAGAGCGTAA TGCGTGGAAG TTAGCGATGT CAGATAAAGG TTGGTGGCGG CTAGCATTAA CGCCCCAGAC AAATCACGCT ATGCCAACAA AATGGTTCGA GGAGTTGGGT CTGTACTCGT TGCGAGATGG GTATGAGTCA CTAAAAGTAT ATTCGGAACC GCCGTATGCG ACCCACGCTT GTACGGTGGT GTGA
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Protein sequence | MGIPQPQGGP LSPLLSNIVL DELDKELERR GHKFCRYADD CQIYVGSEEA AYRVKESITE YLEQKLKLTV NREKSAATRV TERTYLSHRF GIDGTIHISK PAQTQMKTRV RQITKRNRGR ELKVVIAELT QYLRGWQDYF KLAIRKSSMK RLDEWIRRRL RCYRLKQRKH RYGIATWLQR QGVTERNAWK LAMSDKGWWR LALTPQTNHA MPTKWFEELG LYSLRDGYES LKVYSEPPYA THACTVV
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