Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_01842 |
Symbol | cysS |
ID | 5553343 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | + |
Start bp | 1855255 |
End bp | 1856637 |
Gene Length | 1383 bp |
Protein Length | 460 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640907332 |
Product | cysteinyl-tRNA synthetase |
Protein accession | YP_001445037 |
Protein GI | 156974130 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0215] Cysteinyl-tRNA synthetase |
TIGRFAM ID | [TIGR00435] cysteinyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAAAGA TATATAACAC ACTCACAAGA CAGAAAGAGG AATTCAAACC AATTACAGCC GGCAAAGTTG GCATGTATGT CTGTGGAGTT ACCATCTACG ATCTCTGTCA TATCGGTCAC GGTCGTACTT TCGTTTCTTT CGATGTGGTT TCTCGTTACT TGCGTTACCT TGGTTATGAC CTAACGTTTG TACGTAATAT CACTGACATC GATGACAAAA TCATCAAACG TGCAGCAGAA AACGGTGAAT CTTGTGATTC ATTGACAGAG CGCCTGATTG GCGAAATGCA CGCTGACTTC GATGCACTGA ACATGAAACG CCCTGACGTT GAGCCTCGTG CAACTCAGTT CATCGCTGAA ATCATCGAAT TGGTTGAAAA GCTAATCGAG CGCGGTTTCG CATACGTTGC AGATAACGGC GACGTAATGT TTGAAGTAGG CAAGTTCAAC GAATACGGAA AACTGTCTAA GCAAGACCTT GAGCAGCTGC AAGCTGGTGC GCGTGTTGAT ATCGAAACTG CAAAACGCAG CCCACTGGAC TTCGTACTTT GGAAGATGTC TAAACCGGGT GAACCAACAT GGGAATCACC ATGGGGGCCA GGTCGTCCAG GTTGGCACAT CGAATGTTCT GCAATGAACT CTTCAATCCT AGGTAACCAC TTCGACATTC ACGGTGGCGG TTCTGATCTT CAGTTCCCAC ACCACGAGAA CGAAATCGCG CAATCTTGCT GTGCACACGA CACTCAATAC GTGAACACAT GGATGCACAG CGGCATGGTA ATGGTAGACC GTGAGAAGAT GTCTAAGTCT TTGGGTAACT TCTTTACTAT CCGTGATGTT CTTGGTCACT ACGATGCTGA GACGGTTCGT TACTTCCTAA TGTCTGGTCA CTACCGCAGC CAGCTAAACT ACAGCGAAGA TAACCTAAAT CAAGCGCGTG CTTCTCTTGA GCGTCTATAC ACGTCTCTAC GTGGTCTCGA TCTAAACGCA GCGCCAGCAG GTGGTGAAGA GTACGTATCT CGCTATACTG CAGCGATGAA CGACGACTTC AACACGCCAG AAGCTTACTC AGTACTGTTC GACATGGCGC GTGAAGTAAA CCGTCTTAAG ACAGAAAACC TAGAGAAAGC GAGCGAGCTA GGTGCGCTAA TGCGTGAACT GGCTGACGTG ATCGGTATTC TTCACCAAGA TCCAGAAGCG TTCCTAAAAG GTGACGCTGG TAACGATGAT GAAGTGGCTG AAATCGAAGC ACTAATTAAG CTACGTAACG ACTCTCGTGC AGCGAAAGAC TGGGCTAACG CAGATATGGC TCGTGATAAG CTGACGGAGA TGGGCATTGT TCTGGAAGAT GGTCCAGAAG GCACAACGTG GCGTCGTAAG TAA
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Protein sequence | MLKIYNTLTR QKEEFKPITA GKVGMYVCGV TIYDLCHIGH GRTFVSFDVV SRYLRYLGYD LTFVRNITDI DDKIIKRAAE NGESCDSLTE RLIGEMHADF DALNMKRPDV EPRATQFIAE IIELVEKLIE RGFAYVADNG DVMFEVGKFN EYGKLSKQDL EQLQAGARVD IETAKRSPLD FVLWKMSKPG EPTWESPWGP GRPGWHIECS AMNSSILGNH FDIHGGGSDL QFPHHENEIA QSCCAHDTQY VNTWMHSGMV MVDREKMSKS LGNFFTIRDV LGHYDAETVR YFLMSGHYRS QLNYSEDNLN QARASLERLY TSLRGLDLNA APAGGEEYVS RYTAAMNDDF NTPEAYSVLF DMAREVNRLK TENLEKASEL GALMRELADV IGILHQDPEA FLKGDAGNDD EVAEIEALIK LRNDSRAAKD WANADMARDK LTEMGIVLED GPEGTTWRRK
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