Gene VIBHAR_01840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01840 
Symbol 
ID5553315 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp1853758 
End bp1854420 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content42% 
IMG OID640907330 
ProductUDP-2,3-diacylglucosamine hydrolase 
Protein accessionYP_001445035 
Protein GI156974128 
COG category[S] Function unknown 
COG ID[COG2908] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR01854] UDP-2,3-diacylglucosamine hydrolase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTTCAG AAGCAATCCA TGCCGACGCA CTGTACGTGC TTGGTGATTT GTTCGAATTC 
TGGATTGGTG ACGATGACAA CACCCCTTTT GCAAGTCAAA TCCGTAACGA ATTTAAAGCA 
CTGACGGATT CTGGTGTGCC AACCTTCTTC ATCCAAGGCA ATCGGGATTT CTTACTGGGT 
AAACGCTTTT GCAAAGAAAC CGGTATGACA TTGCTTGATG ATGTCTGCAC AATTGATCTT 
TATGGTCAAA AAGCCGTGAT TCTGCATGGC GATACACTTT GCATTGATGA TGTGAAATAC 
CAAGAGTTTC GAAAAACCGT TCATAAGCCA TGGCTTCAAT GGTTGTTTAA TCGTATTCCC 
TGGTTCGTTA AGAAAAGAAT TGTCGCTAAA GTTCAGTCAG ACATTCGAGA CGACAAACAA 
ACCAAGTCCC TCGACATCAT GGACGTTAAC CAAGGCGAAG TAGAGCGCGT TATGTCTCAA 
AACTGCGTCA ACCTGATGAT TCACGGTCAC ACGCACCGCC CAAATACACA TATTTTTGAA 
TTAAATGGTG TTAAAACAAC ACGTATTGTC TTAGGTGATT GGTATAGCCA AGGCTCGGTT 
TTAAAAGTAG ATTCTGACAA TTTTGACTTG CAAACACGAC CGTTTGACAC AGAATTGAAG 
TAA
 
Protein sequence
MRSEAIHADA LYVLGDLFEF WIGDDDNTPF ASQIRNEFKA LTDSGVPTFF IQGNRDFLLG 
KRFCKETGMT LLDDVCTIDL YGQKAVILHG DTLCIDDVKY QEFRKTVHKP WLQWLFNRIP 
WFVKKRIVAK VQSDIRDDKQ TKSLDIMDVN QGEVERVMSQ NCVNLMIHGH THRPNTHIFE 
LNGVKTTRIV LGDWYSQGSV LKVDSDNFDL QTRPFDTELK