Gene VIBHAR_01798 details

Gene Information

• Locus tag: VIBHAR_01798
• Symbol: lolA
• ID: 5553002
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio harveyi ATCC BAA-1116
• Kingdom: Bacteria
• Replicon accession: NC_009783
• Strand: +
• Start bp: 1814003
• End bp: 1814629
• Gene Length: 627 bp
• Protein Length: 208 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 640907289
• Product: outer-membrane lipoprotein carrier protein
• Protein accession: YP_001444994
• Protein GI: 156974087
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG2834] Outer membrane lipoprotein-sorting protein
• TIGRFAM ID: [TIGR00547] periplasmic chaperone LolA

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAAC TATTTTCAGC GAAACTTTTC TCTGCGCTTG TTTTAAGCTT TTCTCTCTTC 
TCTACTGCAC ACGCCGCGTC TCCTAAAGAT GAATTAAACA AACGCCTATC GATGAACGGT 
GGCTTCAGTG CGGACTTCTC TCAGCAAGTT ATCAGCCCTG AAGGCGAAAC AGTGATGGAA 
GGGGAAGGCA CGGTTGAAAT CGCTCGCCCA AGCCTGTTCC GTTGGAGCAC AACATCCCCT 
GATGAAAACC TATTGGTTTC TGACGGTAAA ACATTGTGGT ACTACAGCCC GTTCATCGAG 
CAAGTGAGTA TCTACTGGCA AGAACAAGCA ACAGAGCAAA CGCCATTTGT TTTGTTAACA 
CGTAACCGCG CAAGTGATTG GGATAATTAC AAGATCTCCC AAAAGGGTGA CCAGTTCACG 
CTTATTCCTA CCGCGGTAGA CTCCACACAG GGCCAATTTC AGATTAATAT TGACGCCAAA 
GGTGTGGTCA AAGGCTTCAA CGTGGTTGAA CAAGACGGTC AGAAAGGCTT GTTTACCTTT 
AATAACGTGA AGCTTGGAAA ACCAAAAGCA GACAGATTCA CATTCACTAT TCCTAATGGC 
GTGGAAGTGG ATGACCAAAG GAATTAA 

 

Protein sequence

MKKLFSAKLF SALVLSFSLF STAHAASPKD ELNKRLSMNG GFSADFSQQV ISPEGETVME 
GEGTVEIARP SLFRWSTTSP DENLLVSDGK TLWYYSPFIE QVSIYWQEQA TEQTPFVLLT 
RNRASDWDNY KISQKGDQFT LIPTAVDSTQ GQFQINIDAK GVVKGFNVVE QDGQKGLFTF 
NNVKLGKPKA DRFTFTIPNG VEVDDQRN