Gene VIBHAR_01774 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01774 
Symbol 
ID5554388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand+ 
Start bp1783345 
End bp1784367 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content47% 
IMG OID640907265 
Producttryptophanyl-tRNA synthetase II 
Protein accessionYP_001444970 
Protein GI156974063 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0180] Tryptophanyl-tRNA synthetase 
TIGRFAM ID[TIGR00233] tryptophanyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACACCA AACAAAATAA CCAACAACGC GAAATCATTC TTACTGGCGA CCGAGCAACA 
GGCCCATTAC ATTTAGGCCA TTACGTTGGT TCTCTGCAAC AACGTGTTGC GCTGCAATCT 
CAACATGACC AAACCATTTC GGTTGCCGAC ATGCAGGGCT TAACCGACAA CGCGCATAAC 
CCTTCCAAGG TTTCTTCCAA TATCTTAAAC GTGGTGGCCG ATTATCTCGT TGTGGGCATC 
GACCCGGCTC AGACCACCAT CTGTTTGCAA TCTCAAGTGC CAGCGCTTGC AGAACTGACT 
ATGTACTACA GCAACTTAGT TTCGATCGCG CGATTAGAGC GTAACCCAAC CGTAAAAAAT 
GAAATTCAAA ATAAGGGCTT TGAGCGTTCG ATTCCGACTG GTTTCCTGAC TTACCCAATC 
TCGCAAGCGG CCGATATCAC CGGCTTTCAT GCAACCTTAG TCCCTGTTGG TGATGATCAA 
CTGCCGATGC TAGAACAAAC TAATGAAATC GTAAGAAAGA TAAACCATCT TAGCGGAAAA 
GAGATTCTGA AAGAGTGTCG TCCGCTGCTG AGTGACGCGC CACGTTTGCC AAGTACTGAT 
GGTAAAAACA AAATGTCGAA AAGCATGGGT AACGCCATTA ACCTAGGCGC GACAGAGAAA 
GAAATCTCAG CCGCCGTGAA GTCTATGTAC ACTGATCCAA ACCACTTACG CATCGAAGAC 
CCAGGCCAAG TAGAAGGCAA CATCGTGTTC ACTTATCTTG ATGCGTTCCA TACCGATAAA 
GCGTATGTGG AAGAGTTAAA AGCGCACTAC CGTCGTGGCG GATTGGGAGA CGGCACAACC 
AAGAAAGTAT TGGAAGAGTG CTTACAAGAA ATGCTGCGAC CAATTCGAGA AAAACGTGCG 
ATGTTCTTAG ACGACAAAGC GCAGCTGATC GACATACTGA AACAAGGCAG CCAACGCTCA 
CGTGAGAAAA CGGAACAAGT TCTGTTTGAT GTGAAAGGCG TATTCGGTTT GAACCTGTTC 
TGA
 
Protein sequence
MNTKQNNQQR EIILTGDRAT GPLHLGHYVG SLQQRVALQS QHDQTISVAD MQGLTDNAHN 
PSKVSSNILN VVADYLVVGI DPAQTTICLQ SQVPALAELT MYYSNLVSIA RLERNPTVKN 
EIQNKGFERS IPTGFLTYPI SQAADITGFH ATLVPVGDDQ LPMLEQTNEI VRKINHLSGK 
EILKECRPLL SDAPRLPSTD GKNKMSKSMG NAINLGATEK EISAAVKSMY TDPNHLRIED 
PGQVEGNIVF TYLDAFHTDK AYVEELKAHY RRGGLGDGTT KKVLEECLQE MLRPIREKRA 
MFLDDKAQLI DILKQGSQRS REKTEQVLFD VKGVFGLNLF