| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_01759 |
|---|
| Symbol | |
|---|
| ID | 5554424 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009783 |
|---|
| Strand | + |
|---|
| Start bp | 1766186 |
|---|
| End bp | 1767433 |
|---|
| Gene Length | 1248 bp |
|---|
| Protein Length | 415 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640907250 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001444955 |
|---|
| Protein GI | 156974048 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
|---|
| TIGRFAM ID | [TIGR01879] amidase, hydantoinase/carbamoylase family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAAAT TTGTAGAAAC TGCCAGCCTA GCGTGGGAAT GGTTGGAAGA CATTGCTCAG
TGCAGCCAAA CCCAAGACCC AGATAGCGAA GGTGTTACTC GTTTGTGTGC CAGTGAAGAG
CACGCGAAAG CGAATGAAAA ACTGCGCGAG TGGATGCTGC TGTCTGGTAT GGAAGTGCGC
ATGGACAATG CTGCAAACCT TATTGGTCGC TACCACAGCC CAAATCCAAA TGCACAGACG
CTGATTTTTG GCTCCCACCA AGATACCGTG CCAAATGGCG GTAAATACGA TGGCATCTTG
GGTGTGATTC TACCGGTTGC GTTGATTCAC TATTTTCATC AGCAGAAACT CGAGTTTCCA
TTCAATATCG ATGTGATCGC TTTCAGTGAT GAAGAGGGCA CTCGATTCCA ATCGACATTG
CTCGGTTCAA AAGCGATATC TGGCACATTC GATCCAAGTG TGTTGGACGC ACAAGATGCC
AATGGCGTGA GCATGCGTGA AGCATTGACG TCGTTTGGTT GCCATCCAGA GCAAATAGAA
AAAGACGCTT ACGACAAAGA TAAAGTGCTT GGTTTTGTAG AACTGCACAT TGAGCAAGGT
CCGCAGCTTG AACAAGCGAA CCTGCCAGTC GGTGTGGTTA CTGCCATCAC GGGGATCGAG
CGTCATACCT TGTCGATTGT TGGTAAAGCC GGACACGCAG GCACAGTGCC AATGGACATG
CGTCAAGATG CGTTAGTCGG GGCAGCTCAG GTCATCCACA TGTTTGATCA ACTGTGCAAA
CGTGAAGACG ACCTAGTGGG TGTCGTGGGC AAAATTGCCA ACTTCCCGAA CGGTGTGAAT
GTGATTCCTC AGCAAACGGA CATCACCATT GAGCTGCGCT CACCAAACGA TGCTTCTCGC
ATTGCTGCGC GACAAGAAAT GTTGGCGAAT ATCGAAACCT TGATGGCGCA GTACAACCTT
GCGTATCGCC ACGAGCAAAC TTATGAGCAA TCGGCCGTAA CCTGTTCGGA TTCACTTTCT
GCGGCGCTGA CTCAAGCGAT CGCGCTATCC AACATTGACA CTAAACACCT ATTCAGTGGC
GCAGGTCACG ATGGTCTAGC AGTGTGCGAA CTGACGGAAA TTGCAATGCT GTTTATGCGT
TGTACAGATG GGGTTAGTCA CCATCCTGAT GAAGCGATTT TGCAACAAGA CCTTGTTGCC
GCAGTTGAGG TGCTTAACCA CTTCTGCATG CTGATGAAAC ACCAATAA
|
|---|
| Protein sequence | MEKFVETASL AWEWLEDIAQ CSQTQDPDSE GVTRLCASEE HAKANEKLRE WMLLSGMEVR
MDNAANLIGR YHSPNPNAQT LIFGSHQDTV PNGGKYDGIL GVILPVALIH YFHQQKLEFP
FNIDVIAFSD EEGTRFQSTL LGSKAISGTF DPSVLDAQDA NGVSMREALT SFGCHPEQIE
KDAYDKDKVL GFVELHIEQG PQLEQANLPV GVVTAITGIE RHTLSIVGKA GHAGTVPMDM
RQDALVGAAQ VIHMFDQLCK REDDLVGVVG KIANFPNGVN VIPQQTDITI ELRSPNDASR
IAARQEMLAN IETLMAQYNL AYRHEQTYEQ SAVTCSDSLS AALTQAIALS NIDTKHLFSG
AGHDGLAVCE LTEIAMLFMR CTDGVSHHPD EAILQQDLVA AVEVLNHFCM LMKHQ
|
|---|
| |