Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_01755 |
Symbol | |
ID | 5554524 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | + |
Start bp | 1760153 |
End bp | 1761289 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640907246 |
Product | hypothetical protein |
Protein accession | YP_001444951 |
Protein GI | 156974044 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACACGTA GAACCACGCT ATCGCTCTTG ATTGCGTCGA GCTTATTATT GGTCGGGTGT GAACAGAGCC AAGAAGGACA AGCGCAAGGT GGCCCAGCGC CGACACCAGA AGTAACGGTA ATGACGGTTG AACCTGTTCG CCAAGCGCTA ACAGTAGAAC TACCGGGTCG CAGCCGAGCG TTTAAAGAGG CAGAAGTTCG CCCTCAGGTA ACGGGTATTA TTTCTGAGCG TAATTTTGAA GAGGGTGGTG TGGTTGAGCA AGGTCAATCG CTTTACCAGA TCGACGATTC TACGTTTCAA GCCGACCTAC TAAGCGCAGA AGCTGAACTG ATCCGTGCGC AAGCATCTGA AGAATCAACC TACTCAACAG TTCGTCGTTA CCGCGCGTTG ATTACGAAGA AATCGATCAG CCAACAAGAT CTCGATGAAG CAGAAGCAGC TTACAAAGAA GCGAAAGCGC AAGTGTTGGT AGCGAAAGCG AGAATCAACA CGGCGAAGAT CAATCTGTCT TACGCACAAG TGAAAGCACC AATCAGCGGT GTGATCAGCA AGTCTAACGT AACGGCGGGT GCGCTGGTAA CGGCAAACCA AGCGGCGACG TTAACAACTA TCCAACAGCT AGACCCAATC AATGTTGATA TCGTGCAATC TTCTGCTCAG TTACTCCGTT TGAAAGCAGC GATGTCACAA GGTCATCTGC AAAAAGACGA GTCCGCTCAA GTGACACTAA CGCTTGAAGA CGGCTCGACT TACGCACACA AAGGCACCAT GAAGTTTACT GAAGTGAACG TAGACGAAAG TACGGGCAGC GTAACGCTAC GTGCAGAATT CGCGAACCCA GATGGTTTAT TGCTACCAGG CATGTTCGTG CGCGCAACGG TAACAGTAGG TGTGGACCCT GTGGCGATTC TTATCCCACA GAACACAGTT ACGCGTGACG CAACGGGTAA AGCCTCAGTA ATGACGGTGG GTGCAGACAA TAAGGTGTCT ATCACTCCAG TGACGACGGC TGAGTCTATT GGTAACCAAT GGCGCATCAC AGAAGGTTTG AAAGTGGGTG ATAAAGTCAT CACAACCGGC CTACAGATGA TCCAACCGGG TAACCCAGTG ACCATCCAAT CAGGTGAGCA GGCATAA
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Protein sequence | MTRRTTLSLL IASSLLLVGC EQSQEGQAQG GPAPTPEVTV MTVEPVRQAL TVELPGRSRA FKEAEVRPQV TGIISERNFE EGGVVEQGQS LYQIDDSTFQ ADLLSAEAEL IRAQASEEST YSTVRRYRAL ITKKSISQQD LDEAEAAYKE AKAQVLVAKA RINTAKINLS YAQVKAPISG VISKSNVTAG ALVTANQAAT LTTIQQLDPI NVDIVQSSAQ LLRLKAAMSQ GHLQKDESAQ VTLTLEDGST YAHKGTMKFT EVNVDESTGS VTLRAEFANP DGLLLPGMFV RATVTVGVDP VAILIPQNTV TRDATGKASV MTVGADNKVS ITPVTTAESI GNQWRITEGL KVGDKVITTG LQMIQPGNPV TIQSGEQA
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