| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_01730 |
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| Symbol | |
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| ID | 5556142 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009783 |
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| Strand | - |
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| Start bp | 1734987 |
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| End bp | 1736309 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640907221 |
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| Product | type III secretion system ATPase |
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| Protein accession | YP_001444926 |
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| Protein GI | 156974019 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1157] Flagellar biosynthesis/type III secretory pathway ATPase |
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| TIGRFAM ID | [TIGR01026] ATPase FliI/YscN family
[TIGR02546] type III secretion apparatus H+-transporting two-sector ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAACGACT TCTCATACAT CACCGAAACT CAACAATCGG CCATCAAGCA AACGCGTTTG
ATCCAAATCC GCGGTCGCGT GACTCAAGTG ACTGGCACCA TCATCAAAGC CGTTGTGCCT
GGTGTTCGTG TCGGCGAGCT TTGTGAGCTA CGAAATCCCG ATCAAACCTT GTCGCTGCTT
GCGGAAGTGG TGGGTTTTCA GCAACACCAT GCGTTGCTTA CCCCACTTGG CAACATGTTT
GGTATTTCCT CCAATACCGA AGTGAGCCCG CTCGGAAAAA TGCACGAAGT CGGCGTTGGC
GATCATCTGT TAGGGAAAAT TCTCGATGGC CTGGGCCGCC CATTCGATGG TTCTCAAAGC
ACTGAACCGA GCGCTTGGTA TCCGGTTTAT CGTGATGCGC CGCCACCAAT GCAGAGAAAA
CTGATTGAAA AGCCGATTTC GATGGGCGTG CGTTCCATCG ACGGATTGCT CACCTGTGGT
GAAGGACAAA GGATGGGCAT TTTTGCTGCG GCTGGCGGAG GTAAAAGTAC CCTGCTCGCC
AAGCTCATTC GCTCTGCCGA TGTCGATGTA ACCGTGCTTG CCCTCATCGG TGAAAGGGGC
CGTGAAGTAA GAGAATTTAT CGAGCACGAC CTTGGTGAAG AAGGCATGGC AAGGTCAGTA
TTGGTTGTCG CAACCTCAGA CCGGCCTGCA ATGGAACGAG CCAAAGCGGC GTTTGTCGCG
ACTTCCATCG CGGAGTACTT CCGCGACCAA GGTAAGCGTG TCCTGCTACT GATGGATTCG
GTGACGCGTT TTGCCCGAGC TCAGCGTGAA ATCGGCTTGG CAGCTGGCGA GCCACCAACA
CGACGAGGCT ATCCGCCTTC AGTTTTTGCC GCACTACCAA AACTGATGGA GCGTGCAGGT
CAATCAGACA AAGGCTCCAT CACCGCGCTG TATACCGTAC TTGTGGAAGG TGACGATATG
ACTGAGCCAG TGGCCGATGA GACCCGTTCG ATACTCGATG GTCACATCAT TCTTTCTCGC
AAACTGGCGG CGATGAACCA CTATCCAGCC ATTGATGTGC TTCGTTCAGC CAGTCGTGTG
ATGAATCAAA TCGTCGATAA AACTCATCAA GCGCCCGCTG CTCACATGCG TGAAATGCTG
GCCAAATATG AAGAAGTCGA ACTGCTGATA AAAATTGGTG AGTACCAACA CGGTGCCGAC
AGTCGCGCGG ATATGGCCAT CGCACAGGGA GATGATATCC GAGCGTTCTT GCGCCAAGGC
ACGCACGAGC CAAGTGAACT CGAAGAGACC GTCACACAGC TGCGTGGGCT TGCAGGCTTA
TGA
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| Protein sequence | MNDFSYITET QQSAIKQTRL IQIRGRVTQV TGTIIKAVVP GVRVGELCEL RNPDQTLSLL
AEVVGFQQHH ALLTPLGNMF GISSNTEVSP LGKMHEVGVG DHLLGKILDG LGRPFDGSQS
TEPSAWYPVY RDAPPPMQRK LIEKPISMGV RSIDGLLTCG EGQRMGIFAA AGGGKSTLLA
KLIRSADVDV TVLALIGERG REVREFIEHD LGEEGMARSV LVVATSDRPA MERAKAAFVA
TSIAEYFRDQ GKRVLLLMDS VTRFARAQRE IGLAAGEPPT RRGYPPSVFA ALPKLMERAG
QSDKGSITAL YTVLVEGDDM TEPVADETRS ILDGHIILSR KLAAMNHYPA IDVLRSASRV
MNQIVDKTHQ APAAHMREML AKYEEVELLI KIGEYQHGAD SRADMAIAQG DDIRAFLRQG
THEPSELEET VTQLRGLAGL
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