| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_01726 |
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| Symbol | |
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| ID | 5556034 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009783 |
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| Strand | - |
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| Start bp | 1731612 |
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| End bp | 1732262 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640907217 |
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| Product | type III secretion system protein |
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| Protein accession | YP_001444922 |
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| Protein GI | 156974015 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4790] Type III secretory pathway, component EscR |
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| TIGRFAM ID | [TIGR01102] type III secretion apparatus protein, YscR/HrcR family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCCAGT TACCTGATGA ACTGAACCTC ATCGTTACAC TCGCCCTTCT TGCTTTGATT
CCTTTCATTG CAATGATGGC GACCTCCTTC GTTAAACTGG CCGTGGTTTT CTCTCTGCTA
AGAAACGCAT TAGGTGTACA ACAGATTCCA CCCAATATGG CCTTGTACGG ATTGGCGATC
ATTCTGTCGA TCTTCATCAT GGCGCCAGTG GGGTTTGAAA CCTATGACTA CGTGACCCAG
CACGAAATCT CACTTGAAGA TTCTGAGAGC ATCGAAGGTT TAATCGAGAG CGGATTGCAG
CCGTACCGTG AGTTCTTGAA AAAGCACATC CGTGAAACTG AATCGGTCTT TTTTACCGAT
GCAGCAAGAA CCTTGTGGCC ACAAAAGTAC GTCGACCGTT TGGAGTCAGA CAGCTTATTG
TTGTTGCTCC CCGCCTTTAC CGTGAGTGAG CTAACGAGAG CGTTTGAGAT TGGCTTCCTG
TTGTACCTGC CATTCATCGC TATCGATCTG ATCGTATCCA ACATCTTGCT GGCCATGGGC
ATGATGATGG TCTCGCCAAT GACCATCTCA CTGCCATTCA AACTGCTGCT CTTTGTGTTG
CTAGACGGTT GGACCAAGTT GACCCATGGC CTAGTGCTCA GTTACGGATA A
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| Protein sequence | MIQLPDELNL IVTLALLALI PFIAMMATSF VKLAVVFSLL RNALGVQQIP PNMALYGLAI
ILSIFIMAPV GFETYDYVTQ HEISLEDSES IEGLIESGLQ PYREFLKKHI RETESVFFTD
AARTLWPQKY VDRLESDSLL LLLPAFTVSE LTRAFEIGFL LYLPFIAIDL IVSNILLAMG
MMMVSPMTIS LPFKLLLFVL LDGWTKLTHG LVLSYG
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