Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_01723 |
Symbol | |
ID | 5555827 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | - |
Start bp | 1729485 |
End bp | 1730534 |
Gene Length | 1050 bp |
Protein Length | 349 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640907214 |
Product | Type III secretory pathway, component EscU |
Protein accession | YP_001444919 |
Protein GI | 156974012 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4792] Type III secretory pathway, component EscU |
TIGRFAM ID | [TIGR00328] flagellar biosynthetic protein FlhB [TIGR01404] type III secretion protein, YscU/HrpY family |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGGAG AAAAAACAGA ACTCCCCACC CCGAAAAAAC TTCGGGATGC CCGGCAAAAA GGGCAAGTCG CTAAAAGTCA GGAAGTCGTC TCATCGGCCT TAATCCTAGC CCTAATTGCC GTCCTATTTG CTTTTGCTGA CTACTATATG TCGCACATCT CTGCCCTACT TTTATTGCCG AGTGAGTTGG CTTATCAAGG GTTTCAGGAT GCGTTGCTTG ACGTAGCCAT CGCCATCGCC AAAGAAATGG TTTACTTGCT GGCACCGATC CTGATCGTGG CGGCATTGAT CGCCATCATG TCGAACATGG GGCAATTCGG CTTGCTGTTT AGTGGTGAAT CCGTCAAACC AGATATCAAA AAGATCAACC CTGTCGAAGG GGCAAAACGA ATTTTCTCGC TAAAGAGCAT CATTGAGTTT ATTAAATCGA TTCTTAAAGT GTCGCTCCTT TCCTGCATTA TTTGGGTCAC TCTGCGGGGC AACTTAAACA CGCTACTGCA AATCCCGACA TGCGGATTAG AGTGTGTACC GACCATCACC GGCGTATTGG TGAAACAACT CATGATCATC TCTTCCGTCG GCTTTATTGT GATTGCAGCT GCCGATTACG CATATCAAAA ATTCGACCAC ACCAAGCAGC TGAAGATGAC TAAAGACGAG GTCAAACGCG AATATAAAGA GATGGAAGGC AGCCCGGAAA TCAAGAGTAA GCGTCGTCAG TTGCACCAAG AGCTGCAAGC TTCGAACCAA AGAGATAACG TTAAACGTTC GAATGTGTTG GTCACGAACC CAACCCACAT CGCGATTGGT TTGTACTACA AAAAGGGCGA AACACCGCTG CCTGTGATAA CCCTCAAAGA AACCGATGCG ATGGCAAAAC GTATGATCGC GATAGCCCAC GAAGAAGGCA TCCCTGTGAT GCAAAAAGTA CCACTCGCAC GTGCTCTTTA TGCCGATGGT CAGTTAAACC AGTACATTCC AGGCGATCTT ATTGAAGCCA CCGCTGAGAT CCTGCGTTGG GTTGCGTCTC TTGAGCAGTC TGAGGAATAG
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Protein sequence | MSGEKTELPT PKKLRDARQK GQVAKSQEVV SSALILALIA VLFAFADYYM SHISALLLLP SELAYQGFQD ALLDVAIAIA KEMVYLLAPI LIVAALIAIM SNMGQFGLLF SGESVKPDIK KINPVEGAKR IFSLKSIIEF IKSILKVSLL SCIIWVTLRG NLNTLLQIPT CGLECVPTIT GVLVKQLMII SSVGFIVIAA ADYAYQKFDH TKQLKMTKDE VKREYKEMEG SPEIKSKRRQ LHQELQASNQ RDNVKRSNVL VTNPTHIAIG LYYKKGETPL PVITLKETDA MAKRMIAIAH EEGIPVMQKV PLARALYADG QLNQYIPGDL IEATAEILRW VASLEQSEE
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