Gene VIBHAR_01687 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01687 
Symbol 
ID5555029 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp1696388 
End bp1697242 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content43% 
IMG OID640907178 
Producthypothetical protein 
Protein accessionYP_001444883 
Protein GI156973976 
COG category[K] Transcription 
COG ID[COG2378] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAAGT GGCCACTTAG GTGGGATCTT TTAGCTCGAT ACAGAATGAT CGAGATCGTT 
GCACTCTGGG AAGGACGGTT AAACACAGGC CATCTAATGC AGAGTTTTGG GATAGGCCGA 
CAACAAGCTT CAAAGGATAT TAATACCTAC TTAGCCGATG TGGCACCCGA CAACCTTATT 
TATGACAAGC AACTAAAAGG CTACAAACCC AGTGATAGCT TTATCCCACA ATTGACGAGC 
GGTCATACTG ATGAATATTT GCACATTCTT GCAAGGAGTG AAGATATTAC TGTTACATTT 
GATGAGCTTG ATATGGGCTT TGAGAATGTC GCTATGGTTC GCCCTGTTAC ACGTAATATC 
TCGCCGCAAG TCTTGCGTCC TCTCGTTCAG GCAATCCGAG AGAAAAAACG TGTCGATATT 
TACTACACAC CTTTAAAGGA TGGCGAAGAA GTTGAGAGAA TAATTTCTCC TCACACTCTA 
GTATGTACAC CTATACGTTG GCATGTAAGA GCCTATTGTG AGCATGCCGG AGACTATCGA 
GATTTCGTAT TGAGCCGCAT TCAAGGGATA CCTGATCTAA ATGATAGTGC CAGCTTCAAG 
AAGCACGGTG ACCCTTTATG GAACCAGAGT GTTAATGTTG AATTGGTAGC AGACCAGCGG 
TTTAGTGAAA AGCAGAAAGC CGTTATCGAA AAAGACTATG CAATGAACGA TGGCGTTTTA 
ACAATCCCAA CCAATGCATC TTTGGTTAGA TATGTACTCG ACGCCTACAA TATTGATATT 
CATACACAAA AGTCTAATCC ACGCGGCCAG CAAATCGTAC TTAGAAACGC AGACGAACTA 
ATGAAGTATT TGTAA
 
Protein sequence
MSKWPLRWDL LARYRMIEIV ALWEGRLNTG HLMQSFGIGR QQASKDINTY LADVAPDNLI 
YDKQLKGYKP SDSFIPQLTS GHTDEYLHIL ARSEDITVTF DELDMGFENV AMVRPVTRNI 
SPQVLRPLVQ AIREKKRVDI YYTPLKDGEE VERIISPHTL VCTPIRWHVR AYCEHAGDYR 
DFVLSRIQGI PDLNDSASFK KHGDPLWNQS VNVELVADQR FSEKQKAVIE KDYAMNDGVL 
TIPTNASLVR YVLDAYNIDI HTQKSNPRGQ QIVLRNADEL MKYL