Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_01638 |
Symbol | |
ID | 5553796 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | + |
Start bp | 1647593 |
End bp | 1648354 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640907129 |
Product | hypothetical protein |
Protein accession | YP_001444834 |
Protein GI | 156973927 |
COG category | [K] Transcription |
COG ID | [COG3710] DNA-binding winged-HTH domains |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAGTGTTA AATATTTAAT AGATGATTGC ATTGTCTTTG AGCCGCTTGA CAGCTTGATA TATACGGCAA AACCCAATAA AGACGTCAAA ATCGTCAAAT ATGATATTGG TGATAATGCT AAAGATATTC TTCTCGAGTT GATTGATAGT GATGGTTGTA TGTCAGCAGA AGAGCTTCTT GAGGCGGTCT GGAGAAAAAA AAGAAACATA GAAGTTGATA TCACAAGTGT AAGGCAGGCA GTTTCGAAGC TTAGGAAAAG CCTCAAGCTT GTAGCTCCAG AAGTCGACGT TATAAAAACG GTTCCTAAAA GGGGGTATGT ACTAGACGTT CATGTTGAAT TGTTCAAAGA CGATAGAAGC GATTCAAACA TCGGTGACAG TGTGAGAAAA AGAAGCCTAG TTAACTGGTT TTTGTTCACA ACTGTCGCCT TGGTTACGGT CTCAGTCATT TTTCTAGTTC ACCCTAGTAA AGGTGTGTGG GGCTCGCCTT TTTCTGAACC CGAAGATATA GAATCACATG ATTTTGGAAT GTCTGTACTC CAATCTAAAC ACCATCCTGT TGATAAAAAA CTACTACCTT TGTTTAAGCA GTGTGCTTCT CAATTAAACC TCTCTAGTAC GGATACTGTT GTAATTTATG CAACGACCGA ACAGTTTATA TCGTTGACGG CATTTTATAG TAAGTCTACT AAAGAACCGG TTACCTTCAG AATAATTCTA CCAAAGGTGG GGGATAGGGA GGGATATAAA TGCGTGCTCT AA
|
Protein sequence | MSVKYLIDDC IVFEPLDSLI YTAKPNKDVK IVKYDIGDNA KDILLELIDS DGCMSAEELL EAVWRKKRNI EVDITSVRQA VSKLRKSLKL VAPEVDVIKT VPKRGYVLDV HVELFKDDRS DSNIGDSVRK RSLVNWFLFT TVALVTVSVI FLVHPSKGVW GSPFSEPEDI ESHDFGMSVL QSKHHPVDKK LLPLFKQCAS QLNLSSTDTV VIYATTEQFI SLTAFYSKST KEPVTFRIIL PKVGDREGYK CVL
|
| |