Gene VIBHAR_01638 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01638 
Symbol 
ID5553796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp1647593 
End bp1648354 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content39% 
IMG OID640907129 
Producthypothetical protein 
Protein accessionYP_001444834 
Protein GI156973927 
COG category[K] Transcription 
COG ID[COG3710] DNA-binding winged-HTH domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGTGTTA AATATTTAAT AGATGATTGC ATTGTCTTTG AGCCGCTTGA CAGCTTGATA 
TATACGGCAA AACCCAATAA AGACGTCAAA ATCGTCAAAT ATGATATTGG TGATAATGCT
AAAGATATTC TTCTCGAGTT GATTGATAGT GATGGTTGTA TGTCAGCAGA AGAGCTTCTT
GAGGCGGTCT GGAGAAAAAA AAGAAACATA GAAGTTGATA TCACAAGTGT AAGGCAGGCA
GTTTCGAAGC TTAGGAAAAG CCTCAAGCTT GTAGCTCCAG AAGTCGACGT TATAAAAACG
GTTCCTAAAA GGGGGTATGT ACTAGACGTT CATGTTGAAT TGTTCAAAGA CGATAGAAGC
GATTCAAACA TCGGTGACAG TGTGAGAAAA AGAAGCCTAG TTAACTGGTT TTTGTTCACA
ACTGTCGCCT TGGTTACGGT CTCAGTCATT TTTCTAGTTC ACCCTAGTAA AGGTGTGTGG
GGCTCGCCTT TTTCTGAACC CGAAGATATA GAATCACATG ATTTTGGAAT GTCTGTACTC
CAATCTAAAC ACCATCCTGT TGATAAAAAA CTACTACCTT TGTTTAAGCA GTGTGCTTCT
CAATTAAACC TCTCTAGTAC GGATACTGTT GTAATTTATG CAACGACCGA ACAGTTTATA
TCGTTGACGG CATTTTATAG TAAGTCTACT AAAGAACCGG TTACCTTCAG AATAATTCTA
CCAAAGGTGG GGGATAGGGA GGGATATAAA TGCGTGCTCT AA
 
Protein sequence
MSVKYLIDDC IVFEPLDSLI YTAKPNKDVK IVKYDIGDNA KDILLELIDS DGCMSAEELL 
EAVWRKKRNI EVDITSVRQA VSKLRKSLKL VAPEVDVIKT VPKRGYVLDV HVELFKDDRS
DSNIGDSVRK RSLVNWFLFT TVALVTVSVI FLVHPSKGVW GSPFSEPEDI ESHDFGMSVL
QSKHHPVDKK LLPLFKQCAS QLNLSSTDTV VIYATTEQFI SLTAFYSKST KEPVTFRIIL
PKVGDREGYK CVL