Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_01610 |
Symbol | tolB |
ID | 5553148 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | + |
Start bp | 1620363 |
End bp | 1621691 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640907101 |
Product | translocation protein TolB |
Protein accession | YP_001444807 |
Protein GI | 156973900 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTGTAC TGCTTGGCAG TCTGACGAGT GTAGCTCACG CTGCATTAGA GCTGGTGATT ACCGATGGTA TTGATTCAGC ACGACCAGTT GCTGTTGTTC CATTCAAATG GGAAGGCAGT GAACCGCTTC CTACCGATAT TTCTGCTGTG ATTGCTTCTG ACTTGCAACG CAGTGGTAAA TTCAGCCCGG TACCAACCAG CAAAATGCCC CAAACGCCAT TCAACGAATC AGAGGTGAAC TTTGATGCGT GGACCGGCTT AGGTGTGGAC GCATTGCTTA CTGGCTCAAT CAAAAAGAAC GAGCAGGGTA ACTACGTAGT TAACTACCAA TTGGTTGACG TAGTGCGCGG CCAGCTAACT GGTGGTAAGA GCAAAGCATT GGGTGGTGAC GGTGAACTGG TCCTTTCTAA AGATCATGTT CTGTTCAACA AGGTTGCAAC AGTTGAAGGC CCACGCATGC GTGAATACGC ACACCGAATC TCTGACTTGG TTTACGAGCA GCTGACGGGT GAACGTGGTG CGTTTATGAC GCGTATTGCT TATGTGGTAG TGAACGATAA AGATAACTTC CCTTACCAAC TTCGTGTTGC GGATTACGAC GGTTACAACG AGCGTTTAGT TCTACGTTCT AAGCAGCCAC TGATGTCTCC TGCATGGTCT CCAGATGGTC AAAAGCTGGC TTATGTTAGC TTCCAAAATG GCCAAGCTGA AATCTTCATC ATGAACATCT ATACCGGCGA GCGCGAGAAG ATTACTTCAT ACCCTCGTCA CAATGGTGCG CCAAGATTCT CTCCAGATGG CAGCCAGTTA GCACTGGTAC TTTCTAAGAC TGGCTCGCTT CAGGTATACA CTTTGGATCT GAAAACTCGC AAGCTGACAC AAATTACGCG TGGCAGATCA AATAATACAG AACCGTTCTG GCACCCTGAT GGTAAATCAC TGATTTTCAC ATCTGACAGG GGTGGTAAAC CTCAGATTTA TCAAGTAGAT TTGGGCAGCG GTTCTACTAA CCGTTTGACT TGGCAAGGCA GCCAAAACTT AGGTGGTCAA ATCACCCCTG ATGGTCGATT CCTAGTCATG GTGAATCGCA GTGATTCGGG TTTCAACTTG GCTAAACAAG ATTTGGAAAC AGGCGCTCTT CAGGTTCTAA CAAAAACATT GCTTGATGAG TCTCCGAGCA TTGCCCCAAA TGGTGGCATG GTTATCTATA GCTCGATTTA CAACAAGAAA AACGTACTAT CGATGGTGTC AATTGATGGT CGATTTAAAG CTAGATTACC GGCAACAAAT GGGCGTGTAA GAGCTCCCGC ATGGTCACCG TTTTTGTAG
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Protein sequence | MFVLLGSLTS VAHAALELVI TDGIDSARPV AVVPFKWEGS EPLPTDISAV IASDLQRSGK FSPVPTSKMP QTPFNESEVN FDAWTGLGVD ALLTGSIKKN EQGNYVVNYQ LVDVVRGQLT GGKSKALGGD GELVLSKDHV LFNKVATVEG PRMREYAHRI SDLVYEQLTG ERGAFMTRIA YVVVNDKDNF PYQLRVADYD GYNERLVLRS KQPLMSPAWS PDGQKLAYVS FQNGQAEIFI MNIYTGEREK ITSYPRHNGA PRFSPDGSQL ALVLSKTGSL QVYTLDLKTR KLTQITRGRS NNTEPFWHPD GKSLIFTSDR GGKPQIYQVD LGSGSTNRLT WQGSQNLGGQ ITPDGRFLVM VNRSDSGFNL AKQDLETGAL QVLTKTLLDE SPSIAPNGGM VIYSSIYNKK NVLSMVSIDG RFKARLPATN GRVRAPAWSP FL
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