Gene VIBHAR_01608 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01608 
Symbol 
ID5553256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand+ 
Start bp1618843 
End bp1619286 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content49% 
IMG OID640907099 
Producthypothetical protein 
Protein accessionYP_001444805 
Protein GI156973898 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID[TIGR02801] TolR protein 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGGTT ACCAACCTAA AAAGCGTAAA ATGACTGCAG AGATCAACGT CGTACCTTAC 
ATCGACGTGA TGCTAGTTCT GTTGATCATT TTCATGGCGA CCGCTCCATT TGTGACTCAA 
GGCGTGGATG TGGATCTACC ACAAACGTCG ACGGCTGAAT CCATGCAAGA TCTCGCTGGT 
GATACTGACA GCAGCTTCAT CATTATCGAA ATCGATCGTG ACGGCAATTT AGGCCTGAGC 
GTGAATGATG AAGAGGTTCA ACGCGGTCTA TCACTACAAG ACGTGATTGT GCGCGTGAAA 
GCCGAGCGTG AGATTAAGCC TGATTCACCT GTTGCCGTCG GTGGTGATGC GGCAACGCCA 
TACGCTGACG TTGTACTTTT GCTTGACGAG TTAAGTGGTG CAGGCATCCC AAAAGTGGGT 
CTGATGACCG ATATCAAGGA ATAG
 
Protein sequence
MAGYQPKKRK MTAEINVVPY IDVMLVLLII FMATAPFVTQ GVDVDLPQTS TAESMQDLAG 
DTDSSFIIIE IDRDGNLGLS VNDEEVQRGL SLQDVIVRVK AEREIKPDSP VAVGGDAATP 
YADVVLLLDE LSGAGIPKVG LMTDIKE