Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_01597 |
Symbol | aspS |
ID | 5553318 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | + |
Start bp | 1608251 |
End bp | 1610029 |
Gene Length | 1779 bp |
Protein Length | 592 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640907088 |
Product | aspartyl-tRNA synthetase |
Protein accession | YP_001444794 |
Protein GI | 156973887 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0173] Aspartyl-tRNA synthetase |
TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTACCC ATTACTGTGG TCACCTGAAC AAGTCCCTTG CAGGACAAAC TGTAGAACTT TGCGGCTGGG TTAACCGTCG TCGTGATTTA GGCGGTCTTA TTTTTATCGA TATGCGAGAT CGCGAAGGTA TCGTTCAGGT AGTTGTTGAT CCAGATATGG CAGATGCGTA TGAAGTGGCT AACACACTTC GTAATGAATT CTGTATCAAG CTAACTGGTG AAGTTCGCGT TCGTCCAGAA AGCCAAGTAA ACAAAGACAT GGCAACAGGT GAAGTTGAGA TTCTTGCAAA AGGTCTTGAA ATCATCAACC GCTCTGACGT TCTGCCTCTA GACTTCAACC AAAAGAACTC TGAAGAGCAA CGTCTGAAGT ACCGTTACCT AGATCTACGT CGTCCAGAAA TGAGCGACCG CATCAAGCTA CGTGCTAAAG CGTCTAGCTT TGTTCGTCGT TTCCTAGATG ACAACGGCTT CCTAGACATC GAAACACCAG TACTAACAAA AGCGACACCA GAAGGCGCTC GTGACTACCT AGTACCTAGC CGTGTTCACA AAGGCAGCTT CTACGCGCTT CCTCAGTCTC CACAGCTATT CAAACAGCTT CTAATGATGT CTGGTTTTGA TCGTTACTAC CAAATCGTTA AGTGTTTCCG TGATGAAGAC TTGCGTGCTG ACCGTCAACC AGAATTCACT CAGATCGATA TCGAAACGTC ATTCATGACG GCAGACCAAG TTCGTGCCAC GACTGAGAAA ATGGTTCGTG AAATGTGGCA AGAGCTACTG AACGTTGACC TAGGTGAATT CCCAGTAATG CCGTTCAGCG AAGCGATTCG TCGTTTCGGT TCTGACAAAC CAGACCTGCG TAACCCACTA GAACTAGTAG ACGTTGCTGA CCTAGTGAAA GACGTTGAGT TCAAAGTATT CTCTGGTCCA GCAAACGACG AGAAAGGTCG CGTTGCAGTT ATCCGCGTAC CAGGTGGTGC TGAGCTTACT CGTAAGCAAA TCGACGGCTA CGCAGAATTC GTAGGTATCT ACGGTGCGAA AGGTCTAGCA TGGATGAAGG TTAACGACCG TGCAGCTGGC ATGGAAGGTA TCCAATCTCC TGTAGCTAAA TTCCTAAACG AAGACGTAAT CAACGGCATC CTAGATCGTA CTCAAGCGGA ATCTGGCGAC ATCATCCTGT TTGGCGCAGA CAAAGCTAAC ATCGTTGCTG AAGCACTAGG CGCACTTCGT CTTAAACTTG GTAAAGACCT AGATATAACT AAAGAAGGCA CATGGGCTCC TCTATGGGTT GTTGACTTCC CAATGTTCGA AGAAGACGAC GAAGGTAACC TACACGCAAT GCACCACCCA TTCACATCAC CTCTAGGTGT GACTGCGGAA GAGCTAAAAG CGAACCCAGC AGCGGCTAAC TCAAACGCAT ACGACATGGT TCTAAACGGC TATGAAGTGG GCGGTGGTTC TGTACGTATC CACAACGCAG AAATGCAAGC AGCAGTATTC GATATCCTAG GCATCAATGC AGAAGAGCAA CAACTGAAAT TCGGCTTCCT ACTAGACGCT CTGAAATTCG GTACGCCTCC ACACGCTGGT CTTGCATTCG GTCTAGACCG TCTAGTGATG CTGCTATGTG GTACAGAAAA TATCCGTGAT GTTATCGCGT TCCCTAAAAC AACGGCGGCG GCGTGTCTAC TAACAGACGC ACCAAGCCTT GCAAACCCAG CGGCTCTAGA AGAGCTGGCA ATTGCAGTAA CAGTTGCGAA AGAAAAAGAC GCAGAATAA
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Protein sequence | MRTHYCGHLN KSLAGQTVEL CGWVNRRRDL GGLIFIDMRD REGIVQVVVD PDMADAYEVA NTLRNEFCIK LTGEVRVRPE SQVNKDMATG EVEILAKGLE IINRSDVLPL DFNQKNSEEQ RLKYRYLDLR RPEMSDRIKL RAKASSFVRR FLDDNGFLDI ETPVLTKATP EGARDYLVPS RVHKGSFYAL PQSPQLFKQL LMMSGFDRYY QIVKCFRDED LRADRQPEFT QIDIETSFMT ADQVRATTEK MVREMWQELL NVDLGEFPVM PFSEAIRRFG SDKPDLRNPL ELVDVADLVK DVEFKVFSGP ANDEKGRVAV IRVPGGAELT RKQIDGYAEF VGIYGAKGLA WMKVNDRAAG MEGIQSPVAK FLNEDVINGI LDRTQAESGD IILFGADKAN IVAEALGALR LKLGKDLDIT KEGTWAPLWV VDFPMFEEDD EGNLHAMHHP FTSPLGVTAE ELKANPAAAN SNAYDMVLNG YEVGGGSVRI HNAEMQAAVF DILGINAEEQ QLKFGFLLDA LKFGTPPHAG LAFGLDRLVM LLCGTENIRD VIAFPKTTAA ACLLTDAPSL ANPAALEELA IAVTVAKEKD AE
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