Gene VIBHAR_01580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01580 
Symbol 
ID5553475 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp1587286 
End bp1587876 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content47% 
IMG OID640907071 
Producthypothetical protein 
Protein accessionYP_001444777 
Protein GI156973870 
COG category[K] Transcription 
COG ID[COG3070] Regulator of competence-specific genes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACAAAC CGATACTCAA AGACTCAATG AAGCTGTTTG ACGCACTTGG TAATATCAAG 
TCGCGCTCAA TGTTTGGCGG CTTCGGGCTC TTCGCTGATG AAACGATGTT TGCGCTAGTC 
GTAAACAACC AACTTCACAT TCGAGCTGAC CGACAAACAT CTTCTGACTT CGAGACTCAA 
GGACTAAAAC CGTACGTCTA CAAGAAACGT GGTTTCCCAG TTGTTACGAA ATACTATGCG 
ATTTCTGATG ATCTATGGGA TTCAACCGAT CGCTTGATTG AAGTTGCAAA GCAATCTCTA 
GAGACCGCTA AGCAAGAGAA AAAGCAACAA GCGAGCACCA AACCTAACCG ATTGAAAGAC 
CTTCCGAATC TTCGCCTAGC AACCGAACGC ATGTTGAAGA AAGCAGGCAT TGACTCTGTC 
GAGCAGCTAG AAGAAGAAGG TGCCTTAAAC GCTTACAAAG CAATCCAAGA TACGCATGCC 
TCAACGGTAA GCCTTGAGTT GTTGTGGGCG CTAGAGGGCG CAATCAACGG TACACATTGG 
AGCGTCGTAC CTCAGTCTCG CCGAAAAGAA TTGATGAGTG CTCTCCCGTA G
 
Protein sequence
MDKPILKDSM KLFDALGNIK SRSMFGGFGL FADETMFALV VNNQLHIRAD RQTSSDFETQ 
GLKPYVYKKR GFPVVTKYYA ISDDLWDSTD RLIEVAKQSL ETAKQEKKQQ ASTKPNRLKD 
LPNLRLATER MLKKAGIDSV EQLEEEGALN AYKAIQDTHA STVSLELLWA LEGAINGTHW 
SVVPQSRRKE LMSALP