| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_01567 |
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| Symbol | clpA |
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| ID | 5553367 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009783 |
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| Strand | + |
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| Start bp | 1572453 |
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| End bp | 1574723 |
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| Gene Length | 2271 bp |
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| Protein Length | 756 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640907058 |
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| Product | ATP-dependent Clp protease ATP-binding subunit |
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| Protein accession | YP_001444764 |
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| Protein GI | 156973857 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR02639] ATP-dependent Clp protease ATP-binding subunit clpA |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTAAATA AAGAACTAGA GTCAAGCCTT AACGGTGCAT TCGCTCGTGC ACGTGATAAA
CGCCACGAGT TCATGACTGT CGAACACCTC CTACTTGCAT TATTAGAAAA TGATGCAGCT
AAGGAAGCCC TTCTAGCCTG CAAAGCAGAC CTTGATGCTT TGCGAAATGA ACTCGATATT
TTTATCGACC AAACAACGCC GCTCATCCCA GAAAGTGATG AGACGCGCGA AACCCAGCCG
ACATTGAGTT TCCAGCGTGT ACTTCAACGC GCCGTCTTCC ATGTTCAGTC GTCTGGCCGC
AGTGAAGTGA CTGGGGCAAA CGTTCTCGTT GCTATTTTCA GTGAGCAAGA GTCTCACGCT
GCTTACCTAC TTAAAAAGAA CGATATCTCT CGTTTGGACA TTGTTAACTT TATTTCTCAC
GGCATCACTA AAGCATCGGG TTCAAGTGAA GATTCCTCTT CATCTGATTC GTTTGGCTCA
GAAGCACCTG AAGAAACCAA CCCAGAAGAA CGTCTGGAAA GCTTTGCAAC GAACCTAAAC
CAAGTTGCGA AAGCGGGTAA TATCGACCCA TTGATTGGCC GTGACAAAGA GCTTGAGCGC
ACGATTCAAG TGCTGTGCCG TCGTCGTAAG AACAACCCAT TACTTGTGGG TGAAGCTGGC
GTAGGTAAAA CGGCTATCGC GGAAGGTCTT GCGTGGAGAA TTGTAGAAGG CCAAGTGCCT
GAAGTGATTC AAAATAGTGT GATTTATTCC TTAGATATCG GTTCTCTATT GGCTGGCACT
AAATACCGTG GTGATTTTGA GAAACGCTTT AAGTCAGTTT TGAAGCAGCT TGAAAAAGAA
GAAGATGCGA TTCTGTTCAT TGATGAAATT CATACCATCA TCGGTGCGGG TGCAGCTTCT
GGCGGTCAAG TTGACGCTGC TAACCTGATC AAACCTCTAC TGAGTAGCGG TAAGTTGCGT
TGTATCGGTT CAACGACGTA CCAAGAGTAC AGCAACATCT TTGAGAAAGA ACGCGCGCTA
TCTCGCCGTT TCCAAAAGAT CGATGTAGTA GAGCCTTCTT TGGATGATAC GACTAAGATT
TTGATTGGCC TTAAGCCTAA GTACGAAGCT CACCACGAAG TGCGTTACAC CAACAAAGCA
TTGCGTGCTG CTGTAGAGCT ATCGGCGAAG TATATTAACG AACGTCATCT ACCAGATAAA
GCCATTGATG TGATTGATGA GGCGGGTGCA CGTAGCCGTC TAGCACCAGC AAGTCGTCGT
AAGAAAACGG TCGGCGTAGC AGACATCGAA GCGATGGTTG CGAAAATGGC TCGTATTCCA
GAGAAATCAG TGTCGTCTTC AGACAAAGAC ATTCTGAAGA ATCTGGATGA TAAGATGAAG
ATGCTTGTAT TCGGTCAAGA CACGGCGATT GATGCGCTGT CTGAAGCCAT TAAGTTATCT
CGTGCAGGTC TTGGCGTGGA TAACAAACCA GTTGGTTCAT TCTTGTTTGC GGGCCCTACA
GGGGTTGGTA AAACCGAAGT TACTGTTCAG CTTTCTAAGT TGCTTGGTAT CGAACTTCTG
CGCTTCGATA TGTCTGAGTA CGGTGAACGT CATTCAGTCA GTCGCCTGAT TGGTGCGCCT
CCTGGTTACG TGGGCTATGA CCAAGGTGGT CTGTTGACTG ATGCCGTGCT TAAGCATCCA
CACTCGGTGG TTCTGCTTGA TGAAATCGAG AAAGCACACC CAGATATCTT TAACTTGCTA
CTGCAAGTTA TGGATAACGG TACGCTAACA GATAACAATG GTCGTAAAGC TGACTTCCGT
AATGTCATTC TTGTTATGAC AACCAACGCC GGTGTGGCCG AGACAGAGAA GAAATCTATC
GGTCTTATCC AACAAGATAA TAGTCATGAT GCGATGGCGG AAATCAAGAA GGTGTTCACA
CCAGAATTCC GTAACCGTCT AGATAATATC ATTTGGTTCA ATAGCCTAGA TGAAGCGGTG
ATCCACCAAG TGGTTGACAA GTTCATCGTG GAGCTTCAAG TTCAATTGGA TGCTCGTGGC
GTATCAATGG AAGTGTCGCA GGATGCTCGT CATTGGTTGG CACACAAAGG TTACGACAAA
GCGATGGGCG CGCGTCCAAT GGGACGTGTT ATCCAAGAGC AGCTTAAGAA ACCTTTGGCG
AATGAACTTC TGTTCGGCTC ATTGGTTGAC GGTGGTACAG TGAAGGTAAC GCTAGTGAAA
GACGAGCTTA AGTTTGAATA CCTAAGCGAG AAAGAAGCAG CACTTCACTA A
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| Protein sequence | MLNKELESSL NGAFARARDK RHEFMTVEHL LLALLENDAA KEALLACKAD LDALRNELDI
FIDQTTPLIP ESDETRETQP TLSFQRVLQR AVFHVQSSGR SEVTGANVLV AIFSEQESHA
AYLLKKNDIS RLDIVNFISH GITKASGSSE DSSSSDSFGS EAPEETNPEE RLESFATNLN
QVAKAGNIDP LIGRDKELER TIQVLCRRRK NNPLLVGEAG VGKTAIAEGL AWRIVEGQVP
EVIQNSVIYS LDIGSLLAGT KYRGDFEKRF KSVLKQLEKE EDAILFIDEI HTIIGAGAAS
GGQVDAANLI KPLLSSGKLR CIGSTTYQEY SNIFEKERAL SRRFQKIDVV EPSLDDTTKI
LIGLKPKYEA HHEVRYTNKA LRAAVELSAK YINERHLPDK AIDVIDEAGA RSRLAPASRR
KKTVGVADIE AMVAKMARIP EKSVSSSDKD ILKNLDDKMK MLVFGQDTAI DALSEAIKLS
RAGLGVDNKP VGSFLFAGPT GVGKTEVTVQ LSKLLGIELL RFDMSEYGER HSVSRLIGAP
PGYVGYDQGG LLTDAVLKHP HSVVLLDEIE KAHPDIFNLL LQVMDNGTLT DNNGRKADFR
NVILVMTTNA GVAETEKKSI GLIQQDNSHD AMAEIKKVFT PEFRNRLDNI IWFNSLDEAV
IHQVVDKFIV ELQVQLDARG VSMEVSQDAR HWLAHKGYDK AMGARPMGRV IQEQLKKPLA
NELLFGSLVD GGTVKVTLVK DELKFEYLSE KEAALH
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