| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_01563 |
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| Symbol | |
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| ID | 5553350 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009783 |
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| Strand | + |
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| Start bp | 1568783 |
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| End bp | 1571008 |
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| Gene Length | 2226 bp |
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| Protein Length | 741 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640907054 |
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| Product | socitrate dehydrogenase |
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| Protein accession | YP_001444760 |
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| Protein GI | 156973853 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2838] Monomeric isocitrate dehydrogenase |
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| TIGRFAM ID | [TIGR00178] isocitrate dehydrogenase, NADP-dependent, monomeric type |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTACAG AAAAACCTAC AATTATCTAC ACAATCACTG ATGAAGCCCC GGCGTTAGCA
ACCTATTCAT TACTACCAAT CATTCAATCG TTTACTGCAT CGTCTGGCAT TAATGTAGAT
ACACGTGATA TTTCGTTAGC GGGTCGCATC ATCGCTAACT TCCCAGAACA TTTGAAAGAA
GATCAGCGCA TCGGTGACGC GCTAGCAGAA TTAGGCGAAT TGGCGAAAAC ACCAGAAGCG
AACATCATCA AGCTTCCAAA CATCTCAGCC TCAATCCCAC AGCTAAAGGC CGCTATTAAA
GAGTTGCAGG CGAAAGGCTA CGAGCTACCA AACTATCCAG AAGAGCCAAG CACTTACGAA
GAAGAAGCGA TCAAAGCGAC TTACGACAAA ATCAAAGGTA GTGCGGTAAA CCCAGTTTTG
CGTGAAGGTA ACTCAGACCG TCGTGCACCA CTTTCAGTGA AGAACTACGC AAAGAAAAAC
CCGCATTCAA TGGGCGCGTG GTCAGCAGAC TCTCAATCTC ACGTTTCAAG CATGGCTGAC
AACGATTTCT TCGGTAGTGA AAAATCGACG ACTATCTCAG GTGCTACCGA CGTTAAAATA
GAATTTGTTG CTGCTGATGG TTCGGTAAAA GAACTTAAAT CAGCATTCCC TCTGCAAGAT
AAAGAAGTGA TCGATTGTGC AGTAATGAAC AAGAAAGCGC TTGTTGAGTT CTTCGAGAAA
GAAATTGCAG AAGCAAAACA GCAAGATGTA CTGCTCTCTC TACATATGAA AGCAACCATG
ATGAAGGTAT CGGACCCAGT TATCTTCGGT CACGCAGTTA AGGTTTACTA CAAAGACGTA
TTTGCGAAAT ACGGTAAGCT GTTTGAAGAG CTAGGCGTTG ATGTAAACAA CGGTATCGGT
GACGTATATG CGAAGATTGA AGCGCTACCT GCAGAACAAA AAGCAGAAAT CGAAGCAGCT
ATTCTTGCGG TATACGAAAC GCAACCAGCA CTAGCTATGG TGGATTCAGA TCGCGGTATT
ACTAACCTAC ACGTACCAAG CGATATCATT GTTGATGCTT CTATGCCTGC AATGCTACGT
GCTTCTGGCC AAATGTGGGG ACCAGACGGC AAGCAGAAAG ATACGAAAGC AATGATTCCA
GATCGTAGCT ACGCGGCTAT TTACCAAGCG GTGATCGACT TCTGTAAAGA ACATGGTGCG
TTTGACCCAA CAACAATGGG CAGCGTTCCA AACGTCGGTC TAATGGCCCA AAAAGCTGAA
GAGTACGGTT CTCACGACAA GACCTTCATC TTAGATGCAG CAGGCAGTGT GCGTGTTGTA
GCTGCTTCTG GTGCGGTTCT TCTTGAACAA GCGGTAGAAG AAGGTGACAT CTTCCGTATG
TGTCAGGTGA AAGACGCGCC AATTCAAGAC TGGGTGAAAC TTGCTGTTAC TCGTGCTCGT
GCTTCAGGTG CTCCAGCGGT ATTCTGGCTA GACGAAGCTC GTGCTCACGA TGCAGAACTT
ATCAAGAAAG TAAATGCGCA CCTTCCTGAG CACGACACTT CAGGTTTAGA GATCAAGATC
CTGGCACCAA TCGACGCATG TAAATTCTCT CTAGAGCGTA TCAAAGAAGG TCTAGACACC
ATTTCGGTAA CAGGTAACGT ACTTCGTGAC TACCTAACTG ATTTGTTCCC AATTCTGGAG
CTTGGTACTT CTGCGAAGAT GCTATCTATT GTGCCACTAA TGAATGGTGG TGGTTTATTT
GAAACGGGTG CAGGCGGTTC AGCTCCTAAA CACGTTCAAC AGGTAGAAAA AGAAAACCAC
TTACGTTGGG ATTCTTTGGG TGAGTTCCTT GCACTTGCGG CATCTCTTGA GCACCTAAGC
ACGGTTGCTG GCAATGCAAA AGCACAGGTG CTTGCCGATG CACTTGATAA AGCAACGGGT
GAGTTCCTAG ACAACAACAA GTCACCATCA CGTAAAGTTG GTGAGTTGGA TAACCGTGGT
AGCCATTACT ACCTTGCGTC TTACTGGGCG AAAGCACTCG CTGAGCAAAC GGCAGATGCT
GATCTAGCGG CTGAGTTTGT GCCAGTAGCA GCCGCGCTTG CGCAGCAAGA AGAAGCGATT
GTTTCCGAGC TAAACAATGC ACAGGGTGTG AAAGGTGAGC TAGGCGGTTA CTATTCACTG
GATGATGCGC TAGCTTCTAC ATTGATGCGC CCGAGCGCAA CGCTGAACGC AATCATCAAT
AAATAA
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| Protein sequence | MPTEKPTIIY TITDEAPALA TYSLLPIIQS FTASSGINVD TRDISLAGRI IANFPEHLKE
DQRIGDALAE LGELAKTPEA NIIKLPNISA SIPQLKAAIK ELQAKGYELP NYPEEPSTYE
EEAIKATYDK IKGSAVNPVL REGNSDRRAP LSVKNYAKKN PHSMGAWSAD SQSHVSSMAD
NDFFGSEKST TISGATDVKI EFVAADGSVK ELKSAFPLQD KEVIDCAVMN KKALVEFFEK
EIAEAKQQDV LLSLHMKATM MKVSDPVIFG HAVKVYYKDV FAKYGKLFEE LGVDVNNGIG
DVYAKIEALP AEQKAEIEAA ILAVYETQPA LAMVDSDRGI TNLHVPSDII VDASMPAMLR
ASGQMWGPDG KQKDTKAMIP DRSYAAIYQA VIDFCKEHGA FDPTTMGSVP NVGLMAQKAE
EYGSHDKTFI LDAAGSVRVV AASGAVLLEQ AVEEGDIFRM CQVKDAPIQD WVKLAVTRAR
ASGAPAVFWL DEARAHDAEL IKKVNAHLPE HDTSGLEIKI LAPIDACKFS LERIKEGLDT
ISVTGNVLRD YLTDLFPILE LGTSAKMLSI VPLMNGGGLF ETGAGGSAPK HVQQVEKENH
LRWDSLGEFL ALAASLEHLS TVAGNAKAQV LADALDKATG EFLDNNKSPS RKVGELDNRG
SHYYLASYWA KALAEQTADA DLAAEFVPVA AALAQQEEAI VSELNNAQGV KGELGGYYSL
DDALASTLMR PSATLNAIIN K
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