Gene VIBHAR_01556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01556 
Symbol 
ID5555312 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp1562314 
End bp1563099 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content47% 
IMG OID640907047 
Producthypothetical protein 
Protein accessionYP_001444753 
Protein GI156973846 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAATGA TTGAGCCAAC CATGCTGTTG GTCTTGGCAC TAGTCGCTTT TGTTGCTGGA 
TTTATTGATG CTGTAGCCGG TGGCGGAGGC ATGCTCACTG TCCCCGCTTT GCTATCGTTA
GGACTTCCGC CACATATTGC ATTAGGAACC AACAAGCTGG CCGCATCTTT TGCTTCTTCC
ACTGCCGCTT TTACTTATTA TAGAAAGCGC TTGTTCAAAC CACAGTGCTG GGGAAGAGCC
TTTTTAGCAA CTCTGATTGG CGCAACATTA GGAACGCTGT TTGTTGATGC GATTAGTACC
GAATGGTTAG AGAAGGTTTT ACCTCTTATT ATTCTTGCGG CCGCCATGTA CACCGTATTC
CACAAAACAC CGCAATCAAC ACATCAGAGC CCAACACCAG AGCCGTGCCC TATGCTGAAT
AAAAAACAGT ACGCACAAGG GTTTACGATT GGCTTTTATG ATGGTCTAGC GGGCCCAGGC
ACCGGTGCCT TTTGGACAGT AAGCTCGATG GCACTTTATC GATTGAACAT ACTGCTCGCA
TCAGGCCTAG CAAAAGCAAT GAACTTCACC AGCAACTTTA CTTCTCTGAT CACTTTTGCT
GTTTTAGGTC ATATCAACTG GGTGCTAGGC TTAACAATGG GAGTCTGTTT AATGGCTGGC
GCTTTTATTG GCGCACATTC CGCTATTCGG TTTGGCTCCA AATTCATTCG CCCAGTGTTT
GTTACTGTGG TAAGTGTATT GGCGATAAAA CTTGCCTATG ACGCGTGGTT TGTGGGGTTA
GCATGA
 
Protein sequence
MEMIEPTMLL VLALVAFVAG FIDAVAGGGG MLTVPALLSL GLPPHIALGT NKLAASFASS 
TAAFTYYRKR LFKPQCWGRA FLATLIGATL GTLFVDAIST EWLEKVLPLI ILAAAMYTVF
HKTPQSTHQS PTPEPCPMLN KKQYAQGFTI GFYDGLAGPG TGAFWTVSSM ALYRLNILLA
SGLAKAMNFT SNFTSLITFA VLGHINWVLG LTMGVCLMAG AFIGAHSAIR FGSKFIRPVF
VTVVSVLAIK LAYDAWFVGL A