Gene VIBHAR_01553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01553 
Symbol 
ID5555510 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp1560682 
End bp1561488 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content44% 
IMG OID640907044 
Productexonuclease III 
Protein accessionYP_001444750 
Protein GI156973843 
COG category[L] Replication, recombination and repair 
COG ID[COG0708] Exonuclease III 
TIGRFAM ID[TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTAA TTAGCTTTAA CATCAATGGA CTTCGTGCGC GTCTGCATCA ACTCCAAGCG 
CTTATCGATA AACACCAACC AGACGTGATT GGTCTTCAAG AAATCAAGGT ACATGATGAA
GCATTCCCTA TCGAAGATGT CGAGGCGATG GGCTACAAAG TTTACTTTCA CGGTCAAAAA
GCCCACTACG GTGTGGCAAT GCTATGCAAA CAAGAACCGA TCAGCGTTCA AAAAGGTTTC
CCAACCGACA ATGAAGAACA TCAAAAACGC ATGATCATGG CGACGTTTGA AGATGAGAAT
GGTGAGAAGG TAACGGTTCT AAATGGTTAC TTCCCTCAAG GTGACAATAT CGCTCACGAA
ACCAAATACC CATATAAGCG TCAGTTTTAC AAGGATTTGA TGACTTACCT GAATGATCAC
CACACTAACG ATGAACAACT GATCGTCATG GGTGACATTA ATATTAGCCC AATTGATTCA
GATATCGGCA TTGGCGAACC AAACCGTAAG CGTTGGTTGA AGACAGGGAA ATGCTCATTC
CAACCGGAAG AGCGCGAATG GTTGAAAACC TTATTAGACT GGGGCTTCGA AGATACATTC
CGTAACCTGC ACCCGGAAGT CAATGACCGT TTCTCATGGT TTGATTATCG CTCTCGCGGT
TTCGATGATA ATAGAGGCCT ACGTATCGAC GTTATTCTGG TGACACCATC GCTGGCGAAA
AAGTGTGTTG AATCAGATAT CGATTATGAA CTACGTGGTA TTGAAAAGCC TTCTGACCAC
GCCCCGATCT GGTCTACTTT CCAATAG
 
Protein sequence
MKVISFNING LRARLHQLQA LIDKHQPDVI GLQEIKVHDE AFPIEDVEAM GYKVYFHGQK 
AHYGVAMLCK QEPISVQKGF PTDNEEHQKR MIMATFEDEN GEKVTVLNGY FPQGDNIAHE
TKYPYKRQFY KDLMTYLNDH HTNDEQLIVM GDINISPIDS DIGIGEPNRK RWLKTGKCSF
QPEEREWLKT LLDWGFEDTF RNLHPEVNDR FSWFDYRSRG FDDNRGLRID VILVTPSLAK
KCVESDIDYE LRGIEKPSDH APIWSTFQ