Gene VIBHAR_01544 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01544 
Symbol 
ID5555486 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp1549280 
End bp1549927 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content45% 
IMG OID640907035 
Productpyruvate formate-lyase 1 activating enzyme 
Protein accessionYP_001444741 
Protein GI156973834 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1180] Pyruvate-formate lyase-activating enzyme 
TIGRFAM ID[TIGR02493] pyruvate formate-lyase 1-activating enzyme 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCTGTA AGTATTGCCA TAACCGCGAT ACATGGGACA CGCATGATGG CAAAGAAGTC 
ACGGTTGAAG AGATTATTGC AGAAGCAAAA ACCTACCGTC ACTTCATGAA TGCATCAGGT
GGTGGCATTA CGTGTTCTGG TGGCGAAGCA ATGCTTCAGC CGGAATTTGT ACGTGACTTC
TTCCGCGCTG CTCAAGCTGA AGGCATTCAT ACCTGCCTAG ATACTAATGG TTACATCCGT
AAACACACTG ATGTCATCGA CGAAGTATTG GATGCGACAG ACCTTGTCAT GCTTGACCTT
AAACACATGA AAGACGAGAT CCACCAAGAG TTCATCGGTG TGTCTAACCG TCGTGTTTTA
GACTTTGCTC GTTACCTACA TAAGATTGGT CAAAAGACTT GGATTCGTTA TGTTGTAGTC
CCTGGCTACA CTGACGAGCC AGAAGCAGCG CACATGCTGG GTGAGTTCAT CAAAGATATG
GACAACATCG AAAAGGTAGA GCTTCTGCCA TACCACAAAC TTGGTGCGCA CAAATGGGAA
GCGCTTGGTG TTGAATATCC GCTTGATGGC GTCAACCCAC CATCAAAAAA AACAATGGAT
GAAATCCAGT CAATTCTTTC CCAATACAAC TCAAATGTGA AATACTAA
 
Protein sequence
MRCKYCHNRD TWDTHDGKEV TVEEIIAEAK TYRHFMNASG GGITCSGGEA MLQPEFVRDF 
FRAAQAEGIH TCLDTNGYIR KHTDVIDEVL DATDLVMLDL KHMKDEIHQE FIGVSNRRVL
DFARYLHKIG QKTWIRYVVV PGYTDEPEAA HMLGEFIKDM DNIEKVELLP YHKLGAHKWE
ALGVEYPLDG VNPPSKKTMD EIQSILSQYN SNVKY