Gene VIBHAR_01540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01540 
Symbol 
ID5555331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp1544023 
End bp1545318 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content48% 
IMG OID640907031 
Producthypothetical protein 
Protein accessionYP_001444737 
Protein GI156973830 
COG category[S] Function unknown 
COG ID[COG2718] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAACATG AAGAGGGCTA TTTCATGGCG CAATTTATAG ACCGAAGGCT CAATGGCAAG 
AACAAGAGCG CTGTTAATCG ACAGCGCTTC TTGAAGCGCC ATAAAGAGCA GATTAAAGAG
TCGGTAGCTG ACGCAGTGAA TCGACGCTCG ATCACGAACA CGGAAACGGG CGAAGATGTC
GCAATACCGC ACAAAGATAT TAACGAACCT ATGTTTCATC AGGGTAAAGG GGGCGTGCGC
GACCGCGTGC ATCCTGGTAA CGACCAATTT ATCACTGGTG ACAAAATCGA ACGCCCGAAA
GGCGGTGGCC AAGGCGGCGG TGCTGGTGAA GGCAATGCCA GCCCTGACGG TGAAGGCCAA
GACGAGTTCG TTTTCCAAAT TTCAAAAGAC GAATACCTTG ACATCTTATT TGAAGATTTA
GAGTTACCAA ATCTTGAGAA GAACCAAATT GCCAAAATCA CAGAGTGGAA AACCCACCGC
GCGGGTTATC AAACTGCGGG TATTCCATCC AACATTGCCG TTGTTCGCTC GCTACAACAA
TCTCTAGCGC GACGCACGGC AATGACGGCG GGCAAGAAGC GTCTTCTTAA TGAACTGGAA
GATGAGCTTA CTCGCATCAA AAACATCGAG CCCGCTCAGC AGCTTGAAGA AAATCGCCTG
AAGAAGGAAA TTAAGGATCT GCGCAAGAAA ATCGAAAGCG TACCCTTTAT CGATACCTTC
GACTTACGTT TCAAGAACTA TGAGAAGCGT CCAGTGCCAT CGAGCCAAGC GGTCATGTTC
TGTCTAATGG ATGTGTCTGG TTCTATGGAC CAAGCAACCA AAGACATTGC AAAACGCTTC
TATGTACTGC TTTATCTGTT CTTGACGCGT ACCTACGAAA ACGTTGAAGT GGTCTTCATT
CGTCACCATA CCCAAGCGAA AGAAGTCGAT GAGCACGAGT TCTTCTATTC GCAAGAAACG
GGTGGCACGA TTGTTTCGAG CGCACTCAAA CTGATGAATG AGATCGTTCA AGACCGCTAC
CCTGTGGGCC AGTGGAACAT CTACGCAGCT CAAGCATCCG ATGGCGATAA CTGGGCTGAC
GATTCACCTC GCTGTCGTGA CCTACTCGTC AATAAGTTAC TGCCAAATTG TCAGTACTAT
TCATACATCG AGATCACTAA ACGTTCCCAT CAAACGCTGT GGCATGAGTA TGAAAAGCTT
TCCGAAGCCT TTCCAAACTT CGCCATGAAA AACATCCGCT CTGTGGAGGA TATCTTCCCA
GTCTTCCGTG AACTATTCCA AAAAGAAAAT ACGTAA
 
Protein sequence
MKHEEGYFMA QFIDRRLNGK NKSAVNRQRF LKRHKEQIKE SVADAVNRRS ITNTETGEDV 
AIPHKDINEP MFHQGKGGVR DRVHPGNDQF ITGDKIERPK GGGQGGGAGE GNASPDGEGQ
DEFVFQISKD EYLDILFEDL ELPNLEKNQI AKITEWKTHR AGYQTAGIPS NIAVVRSLQQ
SLARRTAMTA GKKRLLNELE DELTRIKNIE PAQQLEENRL KKEIKDLRKK IESVPFIDTF
DLRFKNYEKR PVPSSQAVMF CLMDVSGSMD QATKDIAKRF YVLLYLFLTR TYENVEVVFI
RHHTQAKEVD EHEFFYSQET GGTIVSSALK LMNEIVQDRY PVGQWNIYAA QASDGDNWAD
DSPRCRDLLV NKLLPNCQYY SYIEITKRSH QTLWHEYEKL SEAFPNFAMK NIRSVEDIFP
VFRELFQKEN T