Gene VIBHAR_01418 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01418 
SymbolclpX 
ID5552862 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand+ 
Start bp1434559 
End bp1435839 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content46% 
IMG OID640906909 
ProductATP-dependent protease ATP-binding subunit ClpX 
Protein accessionYP_001444620 
Protein GI156973713 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1219] ATP-dependent protease Clp, ATPase subunit 
TIGRFAM ID[TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGATA AAAGCAAAGA AAGTGGCAGC GGCAAATTGC TGTACTGTTC TTTCTGTGGC 
AAAAGTCAGC ACGAAGTTCG CAAGCTAATC GCAGGTCCGT CAGTTTACAT TTGCGACGAG 
TGTGTCGACT TATGTAACGA TATCATTCGC GAAGAAATCA AGGATGTTCT CCCTAAGAAA 
GAATCTGAAG CGTTACCAAC GCCAAAACAG ATCCGTGAAC ACCTTGATGA CTATGTGATC 
GGACAAGATT ACGCGAAAAA AGTGCTCGCA GTTGCGGTAT ATAACCACTA CAAGCGTTTA 
CGCAATGGTG ATACGACGAG CGAAGGTGTG GAACTTGGTA AAAGTAACAT CCTTCTAATT 
GGTCCAACGG GCAGTGGTAA AACACTGCTT GCTGAGACGC TAGCTCGATT CCTGGATGTT 
CCATTTACAA TGGCTGACGC TACCACACTA ACCGAAGCAG GTTACGTTGG TGAAGACGTT 
GAAAACATCA TCCAGAAGCT TCTGCAAAAA TGTGATTACG ATGTAGCGAA GGCTGAACGC 
GGCATTGTAT ACATTGACGA AATTGACAAA ATTTCTCGTA AAGCTGAAAA CCCATCAATT 
ACGCGCGACG TATCTGGTGA AGGTGTTCAG CAGGCGCTAC TAAAACTTAT CGAAGGTACG 
GTTGCATCGG TTCCACCACA AGGTGGTCGT AAGCATCCAC AGCAAGAATT CCTACAAGTG 
GACACGTCTA AGATCCTGTT CATCTGTGGC GGTGCATTTG CTGGTCTAGA TAAAGTGATT 
GAACAGCGTG TAGCGACAGG CACAGGTATT GGTTTTGGCG CAGAAGTGCG CTCTAAGAAC 
GAAACCAAAA CAGTCGGTGA ACTATTTACT CAGGTAGAAC CTGAAGATCT AGTGAAATAC 
GGTCTGATTC CTGAGTTCAT CGGTCGTCTA CCAGTAACAA CAACACTGAC TGAGCTTGAT 
GAAGAAGCGC TAATTCAGAT CCTATGTGAG CCGAAGAACG CACTGACTAA GCAATACGCA 
GCATTGTTCG AACTAGAAGA CGCAGAACTT GAGTTCCGTG AAGATGCGCT TCGTGCGATC 
GCTAAGAAAG CGATGGAGCG TAAAACAGGT GCTCGTGGTC TACGCTCAAT CTTAGAAAGC 
GTTCTGCTGG AAACCATGTA TGAACTGCCA TCAGCGACGG ACGTAAGTAA AGTCGTGATT 
GATGAATCAG TGATTAACGG TGAATCAGAA CCATTGCTCA TATACAGCAA CGCCGACAAT 
CAGGCCGCTG GAGCAGAATA A
 
Protein sequence
MTDKSKESGS GKLLYCSFCG KSQHEVRKLI AGPSVYICDE CVDLCNDIIR EEIKDVLPKK 
ESEALPTPKQ IREHLDDYVI GQDYAKKVLA VAVYNHYKRL RNGDTTSEGV ELGKSNILLI 
GPTGSGKTLL AETLARFLDV PFTMADATTL TEAGYVGEDV ENIIQKLLQK CDYDVAKAER 
GIVYIDEIDK ISRKAENPSI TRDVSGEGVQ QALLKLIEGT VASVPPQGGR KHPQQEFLQV 
DTSKILFICG GAFAGLDKVI EQRVATGTGI GFGAEVRSKN ETKTVGELFT QVEPEDLVKY 
GLIPEFIGRL PVTTTLTELD EEALIQILCE PKNALTKQYA ALFELEDAEL EFREDALRAI 
AKKAMERKTG ARGLRSILES VLLETMYELP SATDVSKVVI DESVINGESE PLLIYSNADN 
QAAGAE