| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_01393 |
|---|
| Symbol | |
|---|
| ID | 5556233 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009783 |
|---|
| Strand | + |
|---|
| Start bp | 1406078 |
|---|
| End bp | 1407685 |
|---|
| Gene Length | 1608 bp |
|---|
| Protein Length | 535 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640906885 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001444596 |
|---|
| Protein GI | 156973689 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCTGGC AGGCTTTTTG GCCTCATGCT GGTGATCGGG TATTGGATGT GGGAGCAGGT
TCTGGACGAG ATGCAAAATG GATGTCGGAT CAAGGCTGTG AAGTGATTGC TCTTGAACCT
GCCGCATCTA TATTAGCGCT TGGTAAAGTT AAGACGGGTG ATTCGGTTAC TTGGCTTGAT
GATGCCTTGC CTACGCTTGA GAAAACCACC AACTTAGGGC TTCGCTTTGA TCTTATTTTG
GTGAGTGCGG TTTGGATGCA TCTTGCTACT TCTCATCGTG AACGCGCTTT CCGTAAGCTC
TCTAATCTAC TAGCACCAAA TGGTCGATTG GTCATAAGTC TTCGCCATGG TGAGTTCACC
GATGGGCGCA AAGCTTATCC TGTCTCCGTT CAAGAATTAG AAAAGCTGGC GAAGAACAGT
GCGCTTATGG TTAGGCATGT CTCCGACAGT GACGATCAAC TCAAGCGTGA TGACGTTCAT
TGGCAGACAG TTGTCATGTC ACTTCCCGAT GATGGTTCCG GTGATCTCAA CAAGGTTCGC
CATATTATCG TGAACGATTC CAAGTCAGCG ACTTACAAAC TGGCATTGCT ACGAACCTTA
TTACGAATTG CAGACGCACA TTCCGGAGCC GTTATTGATC GTACTGATGG CAAAGTCGCG
ATCCCCCTTG GTTTAGTTGG CCTGTATTGG ATTCGTCAGT TCAAACGTCT CATCGATAAA
GAAAACATCC AGCAGAATTC CAATGCCTCA AAAGGGCTCG GATTCATTAA GCCTGATGGT
TGGGACAAAC TTTCTCATTT AAGTCCTGAT GATTTAGCGA TTGGCACTAT GTTTGTTGGT
GATGATGCGG CTGCTTTAGA CAAAGCGATT AAAGACAGTT TGAAAACCAT CAAAGATGGC
CCAGTTACCT ATACATACCA AGGTGACAAA TCGAATCCAT ATTTTGAAAT GGTACGTTCA
TCGAAAAAGC ATAAAGGCAC TATTGTTGTT GATGGAGCAT TCCTTGAAAG CTATGGCCAA
TTTATTCTGG ATGAGAGCTT GTGGGACTGC TTTAGGCTTT ATCACTCTTG GATTGAACCT
CTGGTGGTCA ACCAATGGAT CCTTGAAATG CAGCGGTTTA GCTCAAACCA AGAGCGAGGC
ATCGCGCTAC AAACATACCA CGACTGTTTG GTTTGGATTG CTAAAGATCA CGACACTCGC
GCGGTACGCA AGCGGGTAGA GCAGTTGCGT TCGAATCACT CTGAGATCAT CAGTGTTTGG
AGTGGGAGTA AGTTGCGTAA TGAGTACCAT GTTGATCACT GCTTGCCGTT CGCCTACTGG
CCGAACAACG ATAAATGGAA TTTGCTGCCA ACATCTAAAA CTGAAAACCT CAACAAGCGC
GATCGGCTGC CAGCGGTCTA TCGGTTGAAT GCGTCGAAAC AACGTATTTT GGATTGGTGG
GAATTGGCGT GGGGAGAATC AGAGACACTC AACCAATCAT TCTTTACAGA AGCATCGCTG
TCTTTACCCA ATGTGCCTGC TTCCTGCCAA GACTTTGAGC ATGTATTTGA GGCCATGGGG
TTGCAGATTC GCGGTGTGAA AAGTCGCCTT TTTATTGCTG AGTGGTAA
|
|---|
| Protein sequence | MSWQAFWPHA GDRVLDVGAG SGRDAKWMSD QGCEVIALEP AASILALGKV KTGDSVTWLD
DALPTLEKTT NLGLRFDLIL VSAVWMHLAT SHRERAFRKL SNLLAPNGRL VISLRHGEFT
DGRKAYPVSV QELEKLAKNS ALMVRHVSDS DDQLKRDDVH WQTVVMSLPD DGSGDLNKVR
HIIVNDSKSA TYKLALLRTL LRIADAHSGA VIDRTDGKVA IPLGLVGLYW IRQFKRLIDK
ENIQQNSNAS KGLGFIKPDG WDKLSHLSPD DLAIGTMFVG DDAAALDKAI KDSLKTIKDG
PVTYTYQGDK SNPYFEMVRS SKKHKGTIVV DGAFLESYGQ FILDESLWDC FRLYHSWIEP
LVVNQWILEM QRFSSNQERG IALQTYHDCL VWIAKDHDTR AVRKRVEQLR SNHSEIISVW
SGSKLRNEYH VDHCLPFAYW PNNDKWNLLP TSKTENLNKR DRLPAVYRLN ASKQRILDWW
ELAWGESETL NQSFFTEASL SLPNVPASCQ DFEHVFEAMG LQIRGVKSRL FIAEW
|
|---|
| |