Gene VIBHAR_01390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01390 
Symbol 
ID5555130 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp1403066 
End bp1404265 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content49% 
IMG OID640906882 
Producthypothetical protein 
Protein accessionYP_001444594 
Protein GI156973687 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1972] Nucleoside permease 
TIGRFAM ID[TIGR00804] nucleoside transporter 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTCAA TTCTTGGTAT CGTAGTCATC CTATTCGTAG CATGGCTGCT TTCGACTAAC 
CGTAAGAACA TTCGTCTACG AACGGTGTCT TTGGCTTTTG CTCTGCAAGT AATCTTCGCG
CTATTGGTAC TTTACGTACC AGCGGGTAAA GAAGCACTTA ACGCAGTAAC TGGCGCGGTT
TCTAACCTAA TCAACTACGG TCAAGAGGGG ATCGCGTTCC TATTTGGCAA CCTAGCAACA
GGTGGCTTTA CCTTCGCGAT TAATGTACTA GGTATCATCG TCTTCTTCTC AGCGCTGATT
TCTGGTTTGT ACCACATTGG TCTAATGCCA AAAGTGATCA ACCTGATCGG TGGTGGTCTA
CAGCGTTTGC TAGGCACAGG CCGTGCAGAA TCGCTATCTG CAACAGCGAA CATCTTCGTT
GGTATGATTG AAGCGCCACT AGTCGTGAAG CCATACCTTA AACACATGAG CGATTCTCAG
TTCTTTGCAG TAATGACTGG TGGTTTGGCA TCGGTTGCTG GTGGCACGCT AGTGGGTTAC
GCATCACTGG GTGTGGATCT TAACTTCCTG ATCGCGGCGG CATTCATGTC AGCACCGGCG
GGTCTTCTAA TGGCTAAAAT CATGATGCCA GAGACAGACA GCGCAGCACA GGATATGGAT
CTAGACCAAG TAGAAATGCC ACGCGCAACC AACGTGGTTG AAGCAATGGC AGACGGCGCA
ATGTCTGGTC TACGTATCGC AGTTGCGGTA GGGGCAACGC TATTGGCGTT CGTGAGTGTT
ATCGCGATGC TAAACGGCAT TCTAGGCTGG TTCGGTGGTC TATTCGGTAT GGAACTGAGC
TTCGAGCTAG TACTTGGCTA CCTATTCGCA CCAATCGCAT GGTTGCTAGG TATTCCTTGG
AATGAAGCTA TCGTAGCTGG CTCCCTGATC GGTAACAAGA TCGTGGTAAA CGAGTTCGTA
GCCTTCATCC AACTGATGGA AGTGAAGTCT CAGCTAAGCG CACACTCACA AGCTATTGTA
ACCTTCGCAC TGTGTGGTTT CGCAAACATC TCAACCATGG CAATGCTGAT TGGTGGTCTA
GGTTCATTAG TACCAGAGAA GCGTTCATTC ATCTCGAAAT ACGGCTTCCG CGCAATCGCA
GCAGGCGTAA TGGCGAACTT GATGAGTGCA TCAATTGCTG GCGTGATCTT GAGTTTGTAA
 
Protein sequence
MNSILGIVVI LFVAWLLSTN RKNIRLRTVS LAFALQVIFA LLVLYVPAGK EALNAVTGAV 
SNLINYGQEG IAFLFGNLAT GGFTFAINVL GIIVFFSALI SGLYHIGLMP KVINLIGGGL
QRLLGTGRAE SLSATANIFV GMIEAPLVVK PYLKHMSDSQ FFAVMTGGLA SVAGGTLVGY
ASLGVDLNFL IAAAFMSAPA GLLMAKIMMP ETDSAAQDMD LDQVEMPRAT NVVEAMADGA
MSGLRIAVAV GATLLAFVSV IAMLNGILGW FGGLFGMELS FELVLGYLFA PIAWLLGIPW
NEAIVAGSLI GNKIVVNEFV AFIQLMEVKS QLSAHSQAIV TFALCGFANI STMAMLIGGL
GSLVPEKRSF ISKYGFRAIA AGVMANLMSA SIAGVILSL