Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_01354 |
Symbol | sdhB |
ID | 5556067 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | + |
Start bp | 1363688 |
End bp | 1364404 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640906846 |
Product | succinate dehydrogenase iron-sulfur subunit |
Protein accession | YP_001444558 |
Protein GI | 156973651 |
COG category | [C] Energy production and conversion |
COG ID | [COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit |
TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTATGA AATTGAACTT CTCTTTATAC CGTTACAACC CGGATGTAGA CACAAAACCT TACATGAAGG ATTACACCCT TGAGGTGGAA GAAGGCTCAG ACATGATGGT TCTGGATGCG TTGATTCTGC TGAAAGAGCA AGATCCTAGC ATCTCATTCC GTCGCTCATG TCGTGAAGGT GTTTGTGGCT CTGATGGCCT GAACATGAAT GGTAAAAACG GTCTAGCGTG TATTACACCG CTTTCAGCAC TGCAGGGTGA CAAGATTGTC ATCCGACCAT TACCAGGTCT ACCAGTAGTA CGCGATCTTA TCGTTGACAT GACGCAGTTC TACGATAACT ATGCGAAAGT TAAGCCTTTC TTGATTGATG ATGGTGCTCT ACCACCTTCA CGCGAGAACT TACAATCGCC AGATGAACGT GCGCATTTAG ATGGATTGTA CGAATGTATC ATGTGTGCAT GTTGTACAAC TTCTTGTCCA TCATTCTGGT GGAACCCAGA TAAATTTATC GGCCCTGCTG GTCTTTTAGC GGCTTACCGC TGGCTAATTG ATAGCCGAGA TACAGCGACT GATGAACGTT TGTCCGATCT TGATGATGCA TTTAGCGTTT TTCGTTGCCA TGGCATCATG AATTGTGTAA GTGTTTGTCC TAAGGGGCTA AATCCTACGA AAGCCATCGG TCACATCAAG TCGATGCTGG TGAATCGTTC GATTTAA
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Protein sequence | MTMKLNFSLY RYNPDVDTKP YMKDYTLEVE EGSDMMVLDA LILLKEQDPS ISFRRSCREG VCGSDGLNMN GKNGLACITP LSALQGDKIV IRPLPGLPVV RDLIVDMTQF YDNYAKVKPF LIDDGALPPS RENLQSPDER AHLDGLYECI MCACCTTSCP SFWWNPDKFI GPAGLLAAYR WLIDSRDTAT DERLSDLDDA FSVFRCHGIM NCVSVCPKGL NPTKAIGHIK SMLVNRSI
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