Gene VIBHAR_01338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01338 
Symbol 
ID5553827 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp1350006 
End bp1350593 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content44% 
IMG OID640906830 
Producthypothetical protein 
Protein accessionYP_001444542 
Protein GI156973635 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2165] Type II secretory pathway, pseudopilin PulG 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAAA GGAATTCTTG TGGCTTTGCC TTACTCGAAC TGATTATTGC GATTGTCATT 
CTCGGTATTC TTGCCGTTGT CGCGGCACCA AGATTCTTAA ATATCCAAGA TGATGCCTAT 
GAAGCAAAGA TGGAAGCAAT TTCAGATCAA TTCGAAACAG CGGTTCGTTT CACACAAAGC 
CAATGGTTGG TAAATGGCGG TACACCTGAA GCTCAGCAAG ACTTAGAAGG TTACGGTGGT 
GGAGAGTTGG ATGTAAATGA GTTTGGCTAC CCTTTAGGAA CAAACAAAGG CAACCGAAAT 
GGAGTGATTG GTAACCCCTA CAACATAGGG CAAGGGAATT CGGGTTGTAT TGCCGTATGG 
CAAGCCCTAC TTGGTGACGA ATATTCCCTA TCAAATAATC GCAACGCTGA CGATCGGTTT 
GACTTTATTA CACGTCGGGT CCAAGACAAA GACTCTCATC AATCTGTTTG CTATTACACG 
TTTACCAAGA AAGGCTACGA ACGAAACCCT GAGAGTTCAA CCTACGTCAT ATGGTACGAC 
TCAAAAACCG GTAGCGTCAC AACATCCAAA CCGACACGAT TAGAATAA
 
Protein sequence
MKKRNSCGFA LLELIIAIVI LGILAVVAAP RFLNIQDDAY EAKMEAISDQ FETAVRFTQS 
QWLVNGGTPE AQQDLEGYGG GELDVNEFGY PLGTNKGNRN GVIGNPYNIG QGNSGCIAVW 
QALLGDEYSL SNNRNADDRF DFITRRVQDK DSHQSVCYYT FTKKGYERNP ESSTYVIWYD 
SKTGSVTTSK PTRLE