Gene VIBHAR_01331 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01331 
SymbolrfaH 
ID5556253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand+ 
Start bp1339452 
End bp1339952 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content46% 
IMG OID640906823 
Producttranscriptional activator RfaH 
Protein accessionYP_001444535 
Protein GI156973628 
COG category[K] Transcription 
COG ID[COG0250] Transcription antiterminator 
TIGRFAM ID[TIGR01955] transcriptional activator RfaH 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACGTT GGTATTTATT GTATTGTAAG CGAGGAGAGC AAGTTAGGGC GAAGCAGCAC 
CTTGAAAACC AGGGTGTGGA GTGTTTTTAC CCTACTGTCG AAGTCGAAAA GATCTTACAT 
GGTAAACGAC AGAAAGTCGA AGAGCCACTG TTCCCTTGCT ATGTGTTTGC CCGATTTGAC 
TATGAAGAAG GCCCAAACTT CACATCAGTT CGCTCTACGC GAGGCGTGGT AGACTTTGTT 
CGCTTTGGTG TACAGCCTAA AGAGATACAG GGTGACCTGG TTTATGAGCT TAAGCAGCTG 
GATAAATGTA TCGACGACCA GACCGATGCT GAGAGCATGC TAAAACCTGG TGATCAAGTG 
CGAGTGAAGA GCGGGCAGTT TGCCGGTATT GATGCCATCT TCCAAGAACA AGATGGTGAG 
AAGCGCTCAA TAATGTTGGT TCAGATGATC ACCAAGCGTG TGCCTGTCAG CATAGACAAC 
AGCGATTTAG ACTTAAAATA G
 
Protein sequence
MKRWYLLYCK RGEQVRAKQH LENQGVECFY PTVEVEKILH GKRQKVEEPL FPCYVFARFD 
YEEGPNFTSV RSTRGVVDFV RFGVQPKEIQ GDLVYELKQL DKCIDDQTDA ESMLKPGDQV 
RVKSGQFAGI DAIFQEQDGE KRSIMLVQMI TKRVPVSIDN SDLDLK