Gene VIBHAR_01320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01320 
Symbol 
ID5554225 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp1328742 
End bp1329692 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content50% 
IMG OID640906812 
Producthypothetical protein 
Protein accessionYP_001444524 
Protein GI156973617 
COG category[R] General function prediction only 
COG ID[COG1090] Predicted nucleoside-diphosphate sugar epimerase 
TIGRFAM ID[TIGR01777] conserved hypothetical protein TIGR01777 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGAAA GGTTTCACAC TCAAAGGGAC GACATGAAGA TACTACTGAC TGGCGGAACA 
GGCTTTATTG GTTCTGAGCT ACTCAAAATG CTCACCACTC ATCAAGTCAT TTTGCTGACG 
CGCACCCCCG CGCGGGCAAA ACAGCGACTT CAGCATGCCG ATGTCGGTAA TACTGAATAC 
CTTGATTCCC TCGATTCACT GGAAGATCTC AACGATGTTG ACGCAGTAAT CAACCTTGCA 
GGTGAGCCCA TCGCAGACAA ACGCTGGAGT CAGGAACAAA AAGAGATCAT CTGCAACAGT 
CGCTGGAAAG TGACCGAGCG CATTGTTGAA CTGATCCACG CCAGTACCGA GCCCCCTTCA 
GTATTCATAA GCGGCTCTGC GGTTGGCTAT TACGGCGATC AACAAGACCA TCCCTTTGAT 
GAATGTCTAC ACGTAAACAG TGAGGCCTTC GCCCATTCTG TGTGTGCTCG ATGGGAGCAA 
ATAGCCAAAC GAGCAGAATC GGAGCAGACA CGTGTGTGCC TATTACGAAC TGGGGTTGTT 
CTTGGCCCTA ATGGTGGTGC TCTCGCCAAG ATGCTGCTGC CTTATAAACT GGGCTTAGGT 
GGCCCGCTAG GCAGCGGTAG ACAGTACATG CCTTGGATTC ATATCTTGGA TATGGTTCGC 
GCCATCATGT ACTTACTCGA AACGCCGCAT GCGCATGGCG AATTCAACTT GTGCGCTCCA 
CACCCAGTTA GCAACAAAAT TTTTAGTGGC ACATTGGCCA AGACTCTTAA GCGTCCGCAT 
ATTTTGTTCA CCCCGAAATG GGTGATGAAC GTGGCAATGG GGGAATCCTC TTGCCTGCTA 
TTTGATAGCA TACGCGCAAA ACCGAAAAAG CTTACCGAGC TTGGCTTTAA ATTCAGTTAC 
TCCCGAGTGG AGCCTGCACT CAAGAACTTG CTTCAAGATA GAAGTTGTTG A
 
Protein sequence
MSERFHTQRD DMKILLTGGT GFIGSELLKM LTTHQVILLT RTPARAKQRL QHADVGNTEY 
LDSLDSLEDL NDVDAVINLA GEPIADKRWS QEQKEIICNS RWKVTERIVE LIHASTEPPS 
VFISGSAVGY YGDQQDHPFD ECLHVNSEAF AHSVCARWEQ IAKRAESEQT RVCLLRTGVV 
LGPNGGALAK MLLPYKLGLG GPLGSGRQYM PWIHILDMVR AIMYLLETPH AHGEFNLCAP 
HPVSNKIFSG TLAKTLKRPH ILFTPKWVMN VAMGESSCLL FDSIRAKPKK LTELGFKFSY 
SRVEPALKNL LQDRSC