Gene VIBHAR_01291 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01291 
SymbolflgF 
ID5553127 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp1296409 
End bp1297158 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content48% 
IMG OID640906783 
Productflagellar basal body rod protein FlgF 
Protein accessionYP_001444495 
Protein GI156973588 
COG category[N] Cell motility 
COG ID[COG4787] Flagellar basal body rod protein 
TIGRFAM ID[TIGR02490] flagellar basal-body rod protein FlgF
[TIGR03506] fagellar hook-basal body proteins 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCGCG CACTGTTTCT CGCAATGAGC GGCGCCAAGC AAAATATGCA GGCCCTGCAA 
TTGCGTGCCA ACAACCTGGC AAACGTGAGT ACAACTGGCT TCCGTGCTGA TTTAGCACAA
GCTCGCTCTA TGCAAGCTTA TGGTGAAGGT TTGCCTTCAC GTGTATTTAG CATGACGGAA
CGTCCAGGAC ATAACTTTGC GCAAGGTAGT GTGATCACAA CCGGTCGTGA CCTCGATATT
ACGGTAGAAG GCAGCGGCTG GATTTCTGTT ATGGACCAAA CTGGCAAAGA AGGTTTGACG
CGTAACGGTA ACCTAAAAGT GGATCAAAAC GGCTTGCTAA CGAATGCAAG TGGTCATGTG
GTGTTGGGCG AAAACGATGC GCCAATTACC TTGCCAATCC CAGTCTCCAA AATCGAAATC
GGTCGTGACG GCACCATCTC TGTACTGCCT CAAGGTGCGC CGGCTGAAGA ATTAGAAGTG
GTTGATCGTA TCAAGCTTGT ACGCACAGAC GATCAAAACT TGTTTAAAGA TACCAATGGC
TTATTCCGCC ATAAAACTCC AAACCAGCCT TACGAAGCAG ACGGCTCTAT CAGCATCCAA
ACCGGTGCGA TTGAAGGTAG TAACGTGAAT GCCGTAGGTG AAATGACCGC TTTGATTGAC
CTTCAACGTC AGTTTGAAAT GCAGGTCAAA ATGATGAGCA CCGCTGAAGA GATGGACAAG
TCTTCAGATT CATTGCTTCG TATGAGTTAA
 
Protein sequence
MDRALFLAMS GAKQNMQALQ LRANNLANVS TTGFRADLAQ ARSMQAYGEG LPSRVFSMTE 
RPGHNFAQGS VITTGRDLDI TVEGSGWISV MDQTGKEGLT RNGNLKVDQN GLLTNASGHV
VLGENDAPIT LPIPVSKIEI GRDGTISVLP QGAPAEELEV VDRIKLVRTD DQNLFKDTNG
LFRHKTPNQP YEADGSISIQ TGAIEGSNVN AVGEMTALID LQRQFEMQVK MMSTAEEMDK
SSDSLLRMS