Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_01291 |
Symbol | flgF |
ID | 5553127 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | + |
Start bp | 1296409 |
End bp | 1297158 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640906783 |
Product | flagellar basal body rod protein FlgF |
Protein accession | YP_001444495 |
Protein GI | 156973588 |
COG category | [N] Cell motility |
COG ID | [COG4787] Flagellar basal body rod protein |
TIGRFAM ID | [TIGR02490] flagellar basal-body rod protein FlgF [TIGR03506] fagellar hook-basal body proteins |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGATCGCG CACTGTTTCT CGCAATGAGC GGCGCCAAGC AAAATATGCA GGCCCTGCAA TTGCGTGCCA ACAACCTGGC AAACGTGAGT ACAACTGGCT TCCGTGCTGA TTTAGCACAA GCTCGCTCTA TGCAAGCTTA TGGTGAAGGT TTGCCTTCAC GTGTATTTAG CATGACGGAA CGTCCAGGAC ATAACTTTGC GCAAGGTAGT GTGATCACAA CCGGTCGTGA CCTCGATATT ACGGTAGAAG GCAGCGGCTG GATTTCTGTT ATGGACCAAA CTGGCAAAGA AGGTTTGACG CGTAACGGTA ACCTAAAAGT GGATCAAAAC GGCTTGCTAA CGAATGCAAG TGGTCATGTG GTGTTGGGCG AAAACGATGC GCCAATTACC TTGCCAATCC CAGTCTCCAA AATCGAAATC GGTCGTGACG GCACCATCTC TGTACTGCCT CAAGGTGCGC CGGCTGAAGA ATTAGAAGTG GTTGATCGTA TCAAGCTTGT ACGCACAGAC GATCAAAACT TGTTTAAAGA TACCAATGGC TTATTCCGCC ATAAAACTCC AAACCAGCCT TACGAAGCAG ACGGCTCTAT CAGCATCCAA ACCGGTGCGA TTGAAGGTAG TAACGTGAAT GCCGTAGGTG AAATGACCGC TTTGATTGAC CTTCAACGTC AGTTTGAAAT GCAGGTCAAA ATGATGAGCA CCGCTGAAGA GATGGACAAG TCTTCAGATT CATTGCTTCG TATGAGTTAA
|
Protein sequence | MDRALFLAMS GAKQNMQALQ LRANNLANVS TTGFRADLAQ ARSMQAYGEG LPSRVFSMTE RPGHNFAQGS VITTGRDLDI TVEGSGWISV MDQTGKEGLT RNGNLKVDQN GLLTNASGHV VLGENDAPIT LPIPVSKIEI GRDGTISVLP QGAPAEELEV VDRIKLVRTD DQNLFKDTNG LFRHKTPNQP YEADGSISIQ TGAIEGSNVN AVGEMTALID LQRQFEMQVK MMSTAEEMDK SSDSLLRMS
|
| |