Gene VIBHAR_01273 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01273 
Symbol 
ID5554790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand+ 
Start bp1284911 
End bp1285867 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content45% 
IMG OID640906765 
Producthypothetical protein 
Protein accessionYP_001444478 
Protein GI156973571 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins
[COG3637] Opacity protein and related surface antigens 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAC TAGCAGCGGT AATTTCAGCT TCTTTACTTA TGGCTTCAGC AGCGCACGCA 
GAAGTATACG TGGGCGGTAA GATGGGTAAG TCTTGGATGG AAGACGCTTG TGTAGCTGGT 
CAAGCTTGTG ACAAAGATGG CTCTACTCTA GGTGCTTTTG TTGGTTACGA AATGAATGAC 
TACTTCTCAG TAGAAGCTGG TTTCGACAAC CTAGGTGACT TTGACCAAAC TTCTTTCGGT 
GGTCACGTAG AAGCAATCAC TCTTGCTCCT AAGTTCAGCC TACCAATCAC TGAAGACATC 
GCACTTTACG GTAAAGTGGG TGGTGCTTAC CTAATGATGA ACGACGGTAA AGACGACTAC 
TCTTACCTAG GTGCTGCAGG TCTTGAATTC AACGTTAGCG AAAACGTAAC AGCACGTGCG 
GAATACCAAA CAATCACTGA CATCAGCAAC GATTCAGTTA AAGCAATGGG CAACTCTGCA 
ACGCTAGGTG TTGCATTCAA GTTCGGCGGC AACGATGAAG TTGTTGTAGA AGAAGAGCCA 
ATCGTTGAAG AAGTGGTTGT AGAAGAAGTT GCTCCAGTAG TAGTAACTAA GACTTTCGAA 
ACTCAAACAA TCGGTACTGG TAGCTTCGCA CTAAACAGCA CAACTCTTAA ACCAGAGAGC 
GCTGCTAAAC TAGACGACCT AGTAGCATTC CTAAACGAGT ACCCACAAGC GAACGTTGAT 
GTAATTGGTT ACACAGATAC TTCAGGCCCA GCAGCTTACA ACCAAAAAGT TTCTGAAAAA 
CGTGCTGAAT CTGTAGCTCA CGCTCTTATA GAGAAAGGCA TCGACGCAGA TCGTATTCAC 
GCTCGTGGCG AAGGTGAAAA CAACCCAATC GCTTCAAACG AGACTCGTGA AGGCCGTGAA 
CAGAACCGTC GTGTAGAAGT TGTTGTTCCT GAGTTTGAAT ACCAAGTTCA GCAATAA
 
Protein sequence
MKKLAAVISA SLLMASAAHA EVYVGGKMGK SWMEDACVAG QACDKDGSTL GAFVGYEMND 
YFSVEAGFDN LGDFDQTSFG GHVEAITLAP KFSLPITEDI ALYGKVGGAY LMMNDGKDDY 
SYLGAAGLEF NVSENVTARA EYQTITDISN DSVKAMGNSA TLGVAFKFGG NDEVVVEEEP 
IVEEVVVEEV APVVVTKTFE TQTIGTGSFA LNSTTLKPES AAKLDDLVAF LNEYPQANVD 
VIGYTDTSGP AAYNQKVSEK RAESVAHALI EKGIDADRIH ARGEGENNPI ASNETREGRE 
QNRRVEVVVP EFEYQVQQ