Gene VIBHAR_01268 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01268 
Symbol 
ID5552803 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp1277599 
End bp1280295 
Gene Length2697 bp 
Protein Length898 aa 
Translation table11 
GC content48% 
IMG OID640906760 
Productcation transport ATPase 
Protein accessionYP_001444473 
Protein GI156973566 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2217] Cation transport ATPase 
TIGRFAM ID[TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATCAGT TCGTTGTACC TATGTCGGGA CTTAACTGCA TGGGCTGTGC GAGAAAAATT 
GAGAAAGCTT TACATACCAA TCACAGTGTT GAGATCATCA ATTTGTCCCC GACCATGGTT
GAAGTGAAAA CCGAATCCCC TCTTTCTTCT ATTGTTGAAT CCATTGAGTC ATTGGGTTAT
CAGGCCGGGC ATCAATATCA GTTCCACCTA GCAGGATTGA GCTGCGGCGG CTGTGTGAAG
AAACTCTCTT CTTTATTAGA AGCAAACCAA GACGTCATTG CGTTTCAAGC CTCTACGACA
CAACTCGATA TCACAACTCT ACTTTCAGAA CAGCAAGTGA TCGATCTTGT GGCGACTCTT
GGCTACACCG CTAGCTTTGA TTCTATTGAA GTAGAAGAAG AAAGCTCACC AGAGATTGAA
CAGGTAGAAA AGCAGAGCAA CACTAGAGAT GCACAGGTGC CACCAGCGAG TATTCAATTG
CAAATGCTGA TTCAAGGCAT GACGTGTGCG AGTTGCGTAT CTTCAGTAGA GAAAGCACTT
ACTAACGTAG AAGGTATTGA GAAAGCACAA GTAAACCTTG CAGAGCAAAG TGCATTAGTG
TTCGCCACTC AAGATACAGA AGCCCTTCAC CAAGCGATCG TTCAATTCGT AAAACAAGCC
GGTTACCAAG CAGAGATCCT GCAAGACGCA GCAACCCAGC AAGAAAAGCA AGCGGCTCAA
CAACTCGCCC AGCAAAAACG CTTCAAGCTA GATGCCATTG CTGGCTTAGT TGTCGGTGCG
CCACTGATGC TTTGGGGTGT ATTTGGCGGC AACATGATGA TTCGCAATAC GAACGACCAG
CTGGCTTGGG GCGCAATTGG TATTCTGTGT CTTTTATTGC TTGCGACAGC GGGTAAGCAC
TTCTTTACTA ACGCATGGTT AGCCGCCACT CACAAACGTG CAACTATGGA CACTTTAGTG
GCTTTAGGCA CTGGTGCGGC ATGGTTCTAT TCGATGCTTG TCGTGATTTT TCCAGATTGG
TTCCCTCTTG CTTCCCGCCA TGTGTACTTT GAAGCGAGCG CAATGATCAT CGGCTTAATT
TCTCTTGGTC ACTATATAGA AGCAAAAGCC AAAGCAAACA CCACACGCTC ACTTCAGGCT
CTGATTAACC TGCAACCTCA GCAAGCGACT GCGATTACAG AACAAGGTGA TCAACAGATC
GCAGTCGAGC AAATCACACT AGGCATGAAA CTGCGCATCA AACCAGGCGA GAAAGTGCCA
GTAGATGGCG TTGTGATACA GGGTGAATCG TACATTGATG AGTCGATGCT AACCGGTGAA
CCCGTACCAG TGTTAAAAGC GCAAGATGCG CAAGTGTCTG CCGGTACACT GAACACAGAT
GGTGGATTAA TCATTGAAGC AACGGGCATC GGCGCGAACA CCATGCTGGC ACGAATCATT
CGTATGGTAC GCACAGCGCA AAGCAGTAAG CCTGCCATTG CCAAATTAGC AGACCAGATT
TCATCGGTAT TTGTTCCGGT CGTGGTCGGC ATCGCAATCC TAGCGGCTTT GGTTTGGTTT
GCGGTAGGTC CAGAGCCTAA AGCCAGTTAC ATGCTTGTCG TAACGACCAC TGTGCTGATC
ATCGCTTGCC CTTGTGCACT GGGCTTAGCA ACGCCATTGT CGGTCACCGT TGGTGTCGGT
AAAGCCGCAG AGCTCGGCAT TCTGATCAAA GACGCTGACG CACTGCAGTT GGCGAGCAAA
ATCGACACGG TCGTATTCGA TAAAACTGGC ACGCTTACTC AAGGTAAACC TAGTGTGCAG
CAAGTGTTTA CTCACACCCC CAGCCAAGAG CACATGTTGG CTCTTGCATA CGCGGCAGAG
CGTCAATCGG AACACCCATT GGCAAAAGCC GTGTGTGATT ATGCGAGAAA GAACAAGACT
GAAAGTGTTG AGTTGAGCGC GTTCGAGAAC ATTCGTGGCC GTGGTATCAG CGCAACTTAC
CAAGCACAAC CGCTATTCAT TGGCTCATTG CAATTTATGC AAAACGAGCA GATTGATACC
AGCCCGATGG AGCAAGCGAT TGAAGATTGT GCAAGCAACG CATGGACACC CGTAGCTGTG
GCGCTTAACA ATGAACTGAT TGGTTTAATT GCCATCGCTG ATCCGATTAA ATCTGATGCC
AAACAAGCGG TGTCTGCATT AAAATCTCAG GGCATAAAAA CCGTCATGCT CACTGGTGAC
AACCAACACG TTGCCAATGC TATCGGTCAA GAGCTCGGCA TTGATGAAGT CATCGCTCAA
GTGATGCCCG ACGAGAAAGC GCAGCACATT AAACTGCTGC AATCTCAAGG CAGTAAGGTG
GCGATGATCG GTGATGGCAT TAATGACGCT CCAGCCCTTG CGCTGGCAGA TCTTGGTGTC
GCAATGGGAA GCGGCAGTGA TGTGGCAATC GAAAGCTCAC AGATGACCAT TCTCAATACA
TCCCCAATGG CGGTTGTACA CGCAATTGAA CTCTCTCGCG CGACACTTAA GAACATGAAA
CAAAACTTGT TCGGCGCCTT TATTTATAAC TCGCTGGGTA TTCCTATCGC CGCCGGCGTA
CTTTACCCCG CGTTCGGATT TTTGCTCAGT CCTGTTGTTG CTGGCGCAGC GATGGCACTG
TCTTCAATCA CGGTCGTCAG TAATGCAAAT CGACTACGAC TGTTTACCAT TAAGTAA
 
Protein sequence
MYQFVVPMSG LNCMGCARKI EKALHTNHSV EIINLSPTMV EVKTESPLSS IVESIESLGY 
QAGHQYQFHL AGLSCGGCVK KLSSLLEANQ DVIAFQASTT QLDITTLLSE QQVIDLVATL
GYTASFDSIE VEEESSPEIE QVEKQSNTRD AQVPPASIQL QMLIQGMTCA SCVSSVEKAL
TNVEGIEKAQ VNLAEQSALV FATQDTEALH QAIVQFVKQA GYQAEILQDA ATQQEKQAAQ
QLAQQKRFKL DAIAGLVVGA PLMLWGVFGG NMMIRNTNDQ LAWGAIGILC LLLLATAGKH
FFTNAWLAAT HKRATMDTLV ALGTGAAWFY SMLVVIFPDW FPLASRHVYF EASAMIIGLI
SLGHYIEAKA KANTTRSLQA LINLQPQQAT AITEQGDQQI AVEQITLGMK LRIKPGEKVP
VDGVVIQGES YIDESMLTGE PVPVLKAQDA QVSAGTLNTD GGLIIEATGI GANTMLARII
RMVRTAQSSK PAIAKLADQI SSVFVPVVVG IAILAALVWF AVGPEPKASY MLVVTTTVLI
IACPCALGLA TPLSVTVGVG KAAELGILIK DADALQLASK IDTVVFDKTG TLTQGKPSVQ
QVFTHTPSQE HMLALAYAAE RQSEHPLAKA VCDYARKNKT ESVELSAFEN IRGRGISATY
QAQPLFIGSL QFMQNEQIDT SPMEQAIEDC ASNAWTPVAV ALNNELIGLI AIADPIKSDA
KQAVSALKSQ GIKTVMLTGD NQHVANAIGQ ELGIDEVIAQ VMPDEKAQHI KLLQSQGSKV
AMIGDGINDA PALALADLGV AMGSGSDVAI ESSQMTILNT SPMAVVHAIE LSRATLKNMK
QNLFGAFIYN SLGIPIAAGV LYPAFGFLLS PVVAGAAMAL SSITVVSNAN RLRLFTIK