| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_01258 |
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| Symbol | |
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| ID | 5554766 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009783 |
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| Strand | - |
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| Start bp | 1266750 |
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| End bp | 1267904 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640906750 |
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| Product | pseudouridylate synthase |
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| Protein accession | YP_001444464 |
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| Protein GI | 156973557 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCACAAG ACAACGCAAA ACGCTTAAAC AAATACATCA GCGAAACGGG CTTTTGCTCG
CGTCGTGAAG CAGACCGTCT TATCGAGCAA GGCCGTGTCA CTATTAATGG TCAACAACCA
GAGATGGGCA CAAAAGTACT GCCAGGCGAT GATGTGTGTG TGGATGGCAG CCCTGTTGCA
GCGAAAGAAA AACCAATTTA CATCGCGTTG AACAAACCAA CCGGTATCAC TTGTACTACT
GAGCGTGATA TTCCGGGTAA CATCGTTGAT TTCATCGGCC ACAAAAAGCG TATCTTCCCT
ATCGGTCGTC TGGATAAACC TTCCGATGGT TTGATCTTCC TAACCAACGA TGGCGACATC
GTAAACAAGA TTCTGCGTGC GGGTAACAAC CACGAGAAAG AATACGTAGT ACGTGTTGAC
AAACCAATCA CGGGTGAATT CCTCAAGCAG ATGTCGAGCG GTGTAAAGAT CCTCGATACG
GTTACTCTGC CTTGTAAAGT AGAGAAAGAG ACCAAATTCT CTTTCCGTAT CGTACTAACT
CAAGGTCTGA ACCGTCAGAT CCGTCGTATG TGTGAAGCGC TAGGCTACGA AGTATTCAAG
CTGCGTCGCG TACGTATTAT GAACATCTCA CTTGATGGCA TTCCTAACGG TAAATGGCGT
TACCTGAGTG ACGACGAAGT GGCAGAGATC CTAGCAATGT GCGAAGGCTC TGTGGGCACA
GAAGAAGCAT CGAAAACAGA TTCTAGAGGC CGCAACATTC GTAAAGCGAC CGACGCGAAG
CTGTACGATA GCCGTGAAGA GAACCAAGGT TCAACGGCGC GCCGCAACCA AAAAACACGC
ACGTTCCTTG GTAACAACGC GGATGAATTC CGTCATGCCC CGAACTCGAA AAAAGGCCAA
CAGCGCCGTC AACGTGATGA TGAAGGTGGA CGCCCAGCAA AAGAACATTA CAAAGCGAAA
CCACAAGGTG AACGCAGCAG ACCGCAAGGC GAGCATGGTA AATCGCAGCG TAAACCAGAT
GCATCAAGCA ATACGCACTC AGCAAACAAA CCTCAATCAC CGAGTAAGCC GAAGCAGCAT
TACATGAACC CAAATGCCGC GAAGCCAAGC AAACCAGCTA AACGCAATGG TGGTACATTG
AGTCTGAAGA AGTAA
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| Protein sequence | MSQDNAKRLN KYISETGFCS RREADRLIEQ GRVTINGQQP EMGTKVLPGD DVCVDGSPVA
AKEKPIYIAL NKPTGITCTT ERDIPGNIVD FIGHKKRIFP IGRLDKPSDG LIFLTNDGDI
VNKILRAGNN HEKEYVVRVD KPITGEFLKQ MSSGVKILDT VTLPCKVEKE TKFSFRIVLT
QGLNRQIRRM CEALGYEVFK LRRVRIMNIS LDGIPNGKWR YLSDDEVAEI LAMCEGSVGT
EEASKTDSRG RNIRKATDAK LYDSREENQG STARRNQKTR TFLGNNADEF RHAPNSKKGQ
QRRQRDDEGG RPAKEHYKAK PQGERSRPQG EHGKSQRKPD ASSNTHSANK PQSPSKPKQH
YMNPNAAKPS KPAKRNGGTL SLKK
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