Gene VIBHAR_01245 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01245 
Symbol 
ID5554722 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp1255306 
End bp1255896 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content47% 
IMG OID640906737 
Productpeptidyl-tRNA hydrolase 
Protein accessionYP_001444451 
Protein GI156973544 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0193] Peptidyl-tRNA hydrolase 
TIGRFAM ID[TIGR00447] peptidyl-tRNA hydrolase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGACTCAAC CAATCAAACT TCTTGTTGGT CTTGCTAATC CGGGACCAGA ATACGCCAAA 
ACTCGCCACA ATGCGGGCGC TTGGGTTGTA GAAGAACTAG CACGCGTTCA CAACGTTACC
CTGAAGAACG AACCAAAGTT CTTTGGCCTA ACAGGACGCA TTATGGTCAA TGGCCAGGAT
CTCCGTTTGC TAATCCCAAC CACCTTCATG AACCTATCTG GCAAAGCGAT CGCAGCACTT
GCGAAGTTTT ACCAAATTAA GCCAGAAGAG ATCATGGTTG CTCATGACGA GCTAGACTTA
CTGCCAGGTG TCGCTAAGTT TAAGAAAGGT GGTGGTCACG GTGGTCACAA TGGTCTGCGT
GACACCATTA GCAAACTGGG CAATAACAAA GATTTTTATC GTCTTCGTAT CGGCATTGGC
CATCCGGGAC ACAAAGATAA AGTGGCGGGT TTTGTACTAG GCAAAGCTCC AGCGAAAGAG
CAAGAGCTAC TAGACGCCGC AGCTGACGAA TCAGTGCGCT GTCTAGATAT CCTAATTAAG
GATGGTCTAT CAAAAGCACA AAATCGCCTC CACACGTTCA AAGCTGAATA A
 
Protein sequence
MTQPIKLLVG LANPGPEYAK TRHNAGAWVV EELARVHNVT LKNEPKFFGL TGRIMVNGQD 
LRLLIPTTFM NLSGKAIAAL AKFYQIKPEE IMVAHDELDL LPGVAKFKKG GGHGGHNGLR
DTISKLGNNK DFYRLRIGIG HPGHKDKVAG FVLGKAPAKE QELLDAAADE SVRCLDILIK
DGLSKAQNRL HTFKAE