Gene VIBHAR_01228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01228 
Symbol 
ID5554939 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp1248078 
End bp1248542 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content44% 
IMG OID640906720 
Productputative metalloprotease 
Protein accessionYP_001444444 
Protein GI156973537 
COG category[R] General function prediction only 
COG ID[COG0319] Predicted metal-dependent hydrolase 
TIGRFAM ID[TIGR00043] metalloprotein, YbeY/UPF0054 family 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAATTG AACTTGATTT GCAACTGGCA GTCGAAAATG AAGAAGGCTT ACCTTCTGAG 
CAAGATTTCC AATTGTGGCT AGATAAGACT ATCCCTTTAT TTCAGCCTCA AGCGGAACTG 
ACAATTCGTA TTGTCGACGA GCAAGAAAGT CACGAGCTAA ACCACGAATA CCGTGGTAAA 
GATAAGCCGA CCAATGTGCT GTCTTTCCCA TTCGAAGTAC CACCTGGTAT GGAAATGGAC 
CTACTAGGCG ATTTGATCAT CTGTCGTCAA GTTGTTGAAA AAGAGGCAGT AGAGCAGAAC 
AAGCCTCTAC TAGCACATTG GGCGCATATG GTTGTACATG GCAGCTTGCA TCTGCTAGGT 
TATGACCATA TCGAGGATGA TGAAGCTGAA GAGATGGAAT CCCTCGAAAC AGAAATCATG 
CAAGGTATGG GTTATGAAGA CCCGTATATT GCTGAAAAAG AGTAA
 
Protein sequence
MAIELDLQLA VENEEGLPSE QDFQLWLDKT IPLFQPQAEL TIRIVDEQES HELNHEYRGK 
DKPTNVLSFP FEVPPGMEMD LLGDLIICRQ VVEKEAVEQN KPLLAHWAHM VVHGSLHLLG 
YDHIEDDEAE EMESLETEIM QGMGYEDPYI AEKE