| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_01216 |
|---|
| Symbol | |
|---|
| ID | 5555163 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009783 |
|---|
| Strand | - |
|---|
| Start bp | 1235192 |
|---|
| End bp | 1236313 |
|---|
| Gene Length | 1122 bp |
|---|
| Protein Length | 373 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640906708 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001444432 |
|---|
| Protein GI | 156973525 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG0772] Bacterial cell division membrane protein |
|---|
| TIGRFAM ID | [TIGR02210] rod shape-determining protein RodA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATGG ATCCCTCTAC AGGCAAAAAC CGCGCCCTGT TTGAACGCTT CCATATCGAC
TTGCCGTTAT TACTCGGCAT CTTTGCATTG ATGGGCTTTG GCCTAGTCAT TATGTACAGC
GCAAGTGGCC AAAGCTTGGC TATGATGGAT CGCCAAGCGA TGCGTATGGT GCTGTCTTTA
TTAGTCATGA TCGTTTTGGC GCAAATCTCA CCAAGAACGT ATGAGAGTCT CGCTCCGCTG
ATGTTCGTTG GAGGGGTCAT ACTCCTCTTT GGGGTGCTGT TCTTTGGTGA AGCATCCAAA
GGTGCACAAC GCTGGCTCAA CCTTGGCTTC GTCCGATTCC AACCATCTGA GCTTCTCAAG
CTTGCCGTGC CTTTGATGGT GGCTCGCTAC ATCGGCCGCC AGCCTCTCCC ACCGACATTC
AAAACCCTGA TTGTGGCGCT GATTATGGTC TGTTTACCGA CTATTCTTAT CGCCAAACAG
CCTGATTTGG GTACCTCTAT CCTAATCGCG GCCTCAGGTA TTTTCGTTAT CTTCCTTGCT
GGTATTAGTT GGAAAATCAT TGCTGCCGCG GCAGTGGCAC TCGGTGGATT TATCCCCATT
TTGTGGTTCT TCTTGATGCG TGAATACCAA AAGGTTCGCG TACGAACGCT GTTTAACCCA
GAGTCGGACC CACTTGGCGC TGGCTACCAC ATCATCCAAA GTAAGATTGC AATTGGTTCT
GGTGGTATTT CCGGCAAAGG CTGGTTACAA GGCACTCAAT CACAATTGGA ATTTCTTCCA
GAGCGACACA CTGACTTTAT CTTTGCAGTA ATTGCAGAAG AATGGGGTAT GATTGGCTTC
CTTTGCCTAT TAGCCATCTA TCTATTCATT ATTGGCCGTG GTCTCTACCT CGCGAGCCAA
GCGCAAACCG CGTTTGGTCG AATGATGGCA GGCAGTATTG TACTCAGCTT CTTCGTATAT
ATTTTTGTAA ATATCGGCAT GGTAAGTGGC ATCCTACCTG TAGTAGGCGT ACCTTTACCG
TTGATCAGTT ATGGTGGTAC CTCAATGGTG ACACTGATGG CTGGTTTTGG CATTCTGATG
TCGATCCACA CACACCGAAA AGCATTCTCT AAGGCGACCT AG
|
|---|
| Protein sequence | MKMDPSTGKN RALFERFHID LPLLLGIFAL MGFGLVIMYS ASGQSLAMMD RQAMRMVLSL
LVMIVLAQIS PRTYESLAPL MFVGGVILLF GVLFFGEASK GAQRWLNLGF VRFQPSELLK
LAVPLMVARY IGRQPLPPTF KTLIVALIMV CLPTILIAKQ PDLGTSILIA ASGIFVIFLA
GISWKIIAAA AVALGGFIPI LWFFLMREYQ KVRVRTLFNP ESDPLGAGYH IIQSKIAIGS
GGISGKGWLQ GTQSQLEFLP ERHTDFIFAV IAEEWGMIGF LCLLAIYLFI IGRGLYLASQ
AQTAFGRMMA GSIVLSFFVY IFVNIGMVSG ILPVVGVPLP LISYGGTSMV TLMAGFGILM
SIHTHRKAFS KAT
|
|---|
| |