Gene VIBHAR_01199 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01199 
Symbol 
ID5555614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp1216004 
End bp1217194 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content49% 
IMG OID640906691 
Producthypothetical protein 
Protein accessionYP_001444415 
Protein GI156973508 
COG category[S] Function unknown 
COG ID[COG5438] Predicted multitransmembrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCAAAA GAATCTATAA CCGATGGGGT TTCACCCTAC TGATTACCCT TATCTCCACC 
CTTATCTTTC AGTTTTCTTC TTCGTGGAGT GAAGATTTCC GTCCTAAATC TCGTCAGCAA
CAAGAGTTTG TTGAAGCAAC CGTCACGCGT TCTATCTCAA ACCATGTTGC GCCAGATCCG
CTCGTGCCAG ATGTGATGAC AGGTAAACAA GTCTTCATGG CAAAAATCCT TGAGGGAGAG
AGCGAAGGCT TAGAGGTGGA AGTCACCAAC CCTCTTAGTC GCCAGCACAA CGTGTATGTC
AGTGAAGGTG ATACCTTCAT TATGATGATC CGCGAAACCA CCAATGGCAC CGTCTATTGG
GCGTATAACC ACAAACGCTC AGATGCGATT TATCTGATGC TTGCGCTGTT TTGTGCGCTG
CTGCTGAGCT TTGGTAAGAA AGAGGGCATT AACTCTATGG TCGCGCTTTA TTTTACTGCT
GCCTTGATCG TTGGTGTGCT GGTGCCAAGT ATCTTTGCGG GCTGGAATCC GATGTTGGTC
AGCATCTTAT TGATGGTGGT GATCATCGTG GTCAGCTTTA TTCTCGTCTC TGGCTATAAC
CGGAAGAGTT TATGCGCCAT GGGCGGTACG TTATTGGGTG TGATAGCTGC GGGTGTCATG
GCGCAGTGGT TTGGAGAAAT GGCACACTTG TCGGGCATTT ATCTCGACAA AGGCGAAGAC
GTAATTTACC TAACGTCGGT GAAGATGGGC ATTCGCTGGC TGATGTTCGT GACTATTGTG
GTGGCAGCGC TTGGGGCCGT TATGGATGTG GCGATTTCGA TTGCATCGGC GTACGCGGAG
CTGCAACAAA CCGACCCTAA GCTTAAACCA AAACAACTGG TTAAAGCCTC GATGAATATT
GGCCGAGACA TCATGGGCAC CATGACTAAC ACCTTGATCT TGGCGTTTGC TGGTGGTTCG
TTGACGACTA TCATGATGGT GTGGGGGCTT AACATGCCGG CGAGTCAGTT TATGAATATG
CCGCTGGTGG GCCTCGCAGT CGTGAACGCG TTGGCGGGTA GTGTGGGGAT TGTGCTGACT
ATTCCTTTTA CTGCGTTTCT AGCGCCTTAT GTGTTCAAGC ATCCTCAATT GGATTCGCAG
CCAGAACAGA TGCAAAAGGA CGTTGAGAAA AACGAAGTTC AGATGTTCTA G
 
Protein sequence
MIKRIYNRWG FTLLITLIST LIFQFSSSWS EDFRPKSRQQ QEFVEATVTR SISNHVAPDP 
LVPDVMTGKQ VFMAKILEGE SEGLEVEVTN PLSRQHNVYV SEGDTFIMMI RETTNGTVYW
AYNHKRSDAI YLMLALFCAL LLSFGKKEGI NSMVALYFTA ALIVGVLVPS IFAGWNPMLV
SILLMVVIIV VSFILVSGYN RKSLCAMGGT LLGVIAAGVM AQWFGEMAHL SGIYLDKGED
VIYLTSVKMG IRWLMFVTIV VAALGAVMDV AISIASAYAE LQQTDPKLKP KQLVKASMNI
GRDIMGTMTN TLILAFAGGS LTTIMMVWGL NMPASQFMNM PLVGLAVVNA LAGSVGIVLT
IPFTAFLAPY VFKHPQLDSQ PEQMQKDVEK NEVQMF