Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_01199 |
Symbol | |
ID | 5555614 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | + |
Start bp | 1216004 |
End bp | 1217194 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640906691 |
Product | hypothetical protein |
Protein accession | YP_001444415 |
Protein GI | 156973508 |
COG category | [S] Function unknown |
COG ID | [COG5438] Predicted multitransmembrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCAAAA GAATCTATAA CCGATGGGGT TTCACCCTAC TGATTACCCT TATCTCCACC CTTATCTTTC AGTTTTCTTC TTCGTGGAGT GAAGATTTCC GTCCTAAATC TCGTCAGCAA CAAGAGTTTG TTGAAGCAAC CGTCACGCGT TCTATCTCAA ACCATGTTGC GCCAGATCCG CTCGTGCCAG ATGTGATGAC AGGTAAACAA GTCTTCATGG CAAAAATCCT TGAGGGAGAG AGCGAAGGCT TAGAGGTGGA AGTCACCAAC CCTCTTAGTC GCCAGCACAA CGTGTATGTC AGTGAAGGTG ATACCTTCAT TATGATGATC CGCGAAACCA CCAATGGCAC CGTCTATTGG GCGTATAACC ACAAACGCTC AGATGCGATT TATCTGATGC TTGCGCTGTT TTGTGCGCTG CTGCTGAGCT TTGGTAAGAA AGAGGGCATT AACTCTATGG TCGCGCTTTA TTTTACTGCT GCCTTGATCG TTGGTGTGCT GGTGCCAAGT ATCTTTGCGG GCTGGAATCC GATGTTGGTC AGCATCTTAT TGATGGTGGT GATCATCGTG GTCAGCTTTA TTCTCGTCTC TGGCTATAAC CGGAAGAGTT TATGCGCCAT GGGCGGTACG TTATTGGGTG TGATAGCTGC GGGTGTCATG GCGCAGTGGT TTGGAGAAAT GGCACACTTG TCGGGCATTT ATCTCGACAA AGGCGAAGAC GTAATTTACC TAACGTCGGT GAAGATGGGC ATTCGCTGGC TGATGTTCGT GACTATTGTG GTGGCAGCGC TTGGGGCCGT TATGGATGTG GCGATTTCGA TTGCATCGGC GTACGCGGAG CTGCAACAAA CCGACCCTAA GCTTAAACCA AAACAACTGG TTAAAGCCTC GATGAATATT GGCCGAGACA TCATGGGCAC CATGACTAAC ACCTTGATCT TGGCGTTTGC TGGTGGTTCG TTGACGACTA TCATGATGGT GTGGGGGCTT AACATGCCGG CGAGTCAGTT TATGAATATG CCGCTGGTGG GCCTCGCAGT CGTGAACGCG TTGGCGGGTA GTGTGGGGAT TGTGCTGACT ATTCCTTTTA CTGCGTTTCT AGCGCCTTAT GTGTTCAAGC ATCCTCAATT GGATTCGCAG CCAGAACAGA TGCAAAAGGA CGTTGAGAAA AACGAAGTTC AGATGTTCTA G
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Protein sequence | MIKRIYNRWG FTLLITLIST LIFQFSSSWS EDFRPKSRQQ QEFVEATVTR SISNHVAPDP LVPDVMTGKQ VFMAKILEGE SEGLEVEVTN PLSRQHNVYV SEGDTFIMMI RETTNGTVYW AYNHKRSDAI YLMLALFCAL LLSFGKKEGI NSMVALYFTA ALIVGVLVPS IFAGWNPMLV SILLMVVIIV VSFILVSGYN RKSLCAMGGT LLGVIAAGVM AQWFGEMAHL SGIYLDKGED VIYLTSVKMG IRWLMFVTIV VAALGAVMDV AISIASAYAE LQQTDPKLKP KQLVKASMNI GRDIMGTMTN TLILAFAGGS LTTIMMVWGL NMPASQFMNM PLVGLAVVNA LAGSVGIVLT IPFTAFLAPY VFKHPQLDSQ PEQMQKDVEK NEVQMF
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