Gene VIBHAR_01186 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01186 
Symbol 
ID5556088 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand+ 
Start bp1202524 
End bp1203615 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content48% 
IMG OID640906678 
Productputative RNA 2'-O-ribose methyltransferase 
Protein accessionYP_001444402 
Protein GI156973495 
COG category[R] General function prediction only 
COG ID[COG2933] Predicted SAM-dependent methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAACAAC TAATGCTCTA TTGCCGTTCT GGCTTTGAGA AAGAGTGTGC TGGTGAAATT 
CAGGACAAAG CAACACAGCT GGAAGTGTAT GGCTTCCCTC GTGTGAAGAA AAACTCAGGT 
TATGTTGTCT TCGAGTGTTA CCAAGATGGA GACGCAGACA AGCTAGCAAA AGGCATCGAC 
TTTAGCGCAC TGATTTTTGC ACGTCAGATG TTTGCTGTGG CGGCTGAGTT TGAAGCGCTA 
CCAAGCGACG ACCGTATCAG CCCAATTCTT GCTGAATTGT CAGAAATCGA AGCATTCCCA 
CGTTGTGGCG ATCTGCGTAT TGAAACCCCA GACACGAACG AAGCAAAAGA GCTGTTGAAG 
TTCTGCCGTA AGTTCACGGT ACCAATGCGT CAAGCTATGC GTGGTAAAGG TCTTATGTGG 
AACAAAGACA ACGCGAAGAA GCCAGTGCTG CATATCTGCT TTGTGGCTCC GGGTCATTGT 
TACGTCGGCT ACTCATACCC GGGCAACAAC TCGCAGTTCT TTATGGGCAT TCCTCGCCTT 
AAGTTTCCAG CAGACGCGCC AAGCCGTTCT ACTTTGAAAC TAGAAGAAGC ATTCCACGTC 
TTCATTCCTC GTGAAGAATG GGATGAGCGT TTAGCGCCAG GTATGTGGGG TGTTGACCTA 
GGTGCTTGTC CGGGCGGTTG GACTTACCAA TTGGTTAAAC GTTCGATGTT CGTTCACTGT 
GTGGACAACG GCATGATGGC GGACAGCCTA ATGGAAACGG GGCAAATCAA GCACCACATG 
GTGGATGGCT TTAAATTCGA ACCAGACCGT AAAAACGTGA CTTGGATTGT GTGTGATATG 
GTTGAGAAGC CAGCACGCGT TGCACACCTT ATGGGTCAGT GGCTGCTAAA AGGTTGGGCG 
AAAGAAGCGA TTTTCAACCT TAAGCTACCA ATGAAAGGTC GCTACGACGA AGTGCTGCAA 
GATCTTGAGA ACCTAAAAAC GTTCCTGATT GAGAACAAGG TGAAATTCAA GCTGCAAGCG 
AAGCACTTGT ACCATGACCG CGAAGAGATC ACGATTCACA TTCAGTGTTT GTCTAACATC 
TCTCCACACT AG
 
Protein sequence
MKQLMLYCRS GFEKECAGEI QDKATQLEVY GFPRVKKNSG YVVFECYQDG DADKLAKGID 
FSALIFARQM FAVAAEFEAL PSDDRISPIL AELSEIEAFP RCGDLRIETP DTNEAKELLK 
FCRKFTVPMR QAMRGKGLMW NKDNAKKPVL HICFVAPGHC YVGYSYPGNN SQFFMGIPRL 
KFPADAPSRS TLKLEEAFHV FIPREEWDER LAPGMWGVDL GACPGGWTYQ LVKRSMFVHC 
VDNGMMADSL METGQIKHHM VDGFKFEPDR KNVTWIVCDM VEKPARVAHL MGQWLLKGWA 
KEAIFNLKLP MKGRYDEVLQ DLENLKTFLI ENKVKFKLQA KHLYHDREEI TIHIQCLSNI 
SPH