Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_01183 |
Symbol | |
ID | 5554078 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | + |
Start bp | 1200615 |
End bp | 1201535 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640906675 |
Product | DNA-binding transcriptional activator GcvA |
Protein accession | YP_001444399 |
Protein GI | 156973492 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTCGCA GATTGCCTCC GTTGAATTCA CTTCGCGTTT TTGAAGCGGC TGCTCGCCAT CTTAGTTTTA CCCGTGCCGC TGAAGAGTTG TTTGTTACTC AAGCGGCTGT AAGTCATCAG ATTAAGGCTC TTGAAGAGTT CCTATCGTTG AAACTCTTCC GTCGTCGCAA TCGTTCATTG TTGCTGACAG AAGAGGGGCA AAGTTACTTT CTGGACATCA AAGATATCTT CACTTCGATA GCTGAAGCGA CCGATAAAGT ATTGGAACGC AGTGAAAAAG GGGCGCTGAC CATCAGTTTG CCACCAAGTT TTGCTATCCA GTGGTTGGTG CCGCGTTTGG CCGATTTTAA TGCCCAAGAA CCAGACATTG ACGTGCGTAT CAAAGCGGTT GATATGGATG AAGGTTCACT GACTGATGAT GTTGATGTGG CTATCTATTA TGGTCGAGGT AACTGGCCTG GTTTACGTGC TGATAAACTC TACCAAGAGT TTTTGATCCC ACTTTGTTCA CCTTCGTTAC TTTTGGGTAA CAAACCATTA GAATCTCTAA GTGACCTCAA ATTACACACC TTGTTACATG ATACTTCTCG TAAAGATTGG AAGCAGTTTG CTCGCCAGCA GAACATCGAA GGCATCAATG TGAATCATGG ACCGATTTTT AGCCACTCGA CCATGGTGTT ACAAGCTGCT GCTCACGGAC AAGGTGTCGC CCTAGGAAAC AACGTACTCG CCAAACCTGA AATGGAAGCG GGACGCTTAA TCGCGCCATT TGATGAAGTG TTGGTGTCGA AGAATGCCTT CTACGTAGTG TGCCACGAAC AGCAAGCGGA CATGGGACGT ATCGCGACGT TTAGAGACTG GATGCTGGCT ACTGCGAGAA AAGAACAAGA GGAAGTATTG GATGAGCCAT TGGATAGCTG A
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Protein sequence | MSRRLPPLNS LRVFEAAARH LSFTRAAEEL FVTQAAVSHQ IKALEEFLSL KLFRRRNRSL LLTEEGQSYF LDIKDIFTSI AEATDKVLER SEKGALTISL PPSFAIQWLV PRLADFNAQE PDIDVRIKAV DMDEGSLTDD VDVAIYYGRG NWPGLRADKL YQEFLIPLCS PSLLLGNKPL ESLSDLKLHT LLHDTSRKDW KQFARQQNIE GINVNHGPIF SHSTMVLQAA AHGQGVALGN NVLAKPEMEA GRLIAPFDEV LVSKNAFYVV CHEQQADMGR IATFRDWMLA TARKEQEEVL DEPLDS
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