Gene VIBHAR_01183 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01183 
Symbol 
ID5554078 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp1200615 
End bp1201535 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content46% 
IMG OID640906675 
ProductDNA-binding transcriptional activator GcvA 
Protein accessionYP_001444399 
Protein GI156973492 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTCGCA GATTGCCTCC GTTGAATTCA CTTCGCGTTT TTGAAGCGGC TGCTCGCCAT 
CTTAGTTTTA CCCGTGCCGC TGAAGAGTTG TTTGTTACTC AAGCGGCTGT AAGTCATCAG
ATTAAGGCTC TTGAAGAGTT CCTATCGTTG AAACTCTTCC GTCGTCGCAA TCGTTCATTG
TTGCTGACAG AAGAGGGGCA AAGTTACTTT CTGGACATCA AAGATATCTT CACTTCGATA
GCTGAAGCGA CCGATAAAGT ATTGGAACGC AGTGAAAAAG GGGCGCTGAC CATCAGTTTG
CCACCAAGTT TTGCTATCCA GTGGTTGGTG CCGCGTTTGG CCGATTTTAA TGCCCAAGAA
CCAGACATTG ACGTGCGTAT CAAAGCGGTT GATATGGATG AAGGTTCACT GACTGATGAT
GTTGATGTGG CTATCTATTA TGGTCGAGGT AACTGGCCTG GTTTACGTGC TGATAAACTC
TACCAAGAGT TTTTGATCCC ACTTTGTTCA CCTTCGTTAC TTTTGGGTAA CAAACCATTA
GAATCTCTAA GTGACCTCAA ATTACACACC TTGTTACATG ATACTTCTCG TAAAGATTGG
AAGCAGTTTG CTCGCCAGCA GAACATCGAA GGCATCAATG TGAATCATGG ACCGATTTTT
AGCCACTCGA CCATGGTGTT ACAAGCTGCT GCTCACGGAC AAGGTGTCGC CCTAGGAAAC
AACGTACTCG CCAAACCTGA AATGGAAGCG GGACGCTTAA TCGCGCCATT TGATGAAGTG
TTGGTGTCGA AGAATGCCTT CTACGTAGTG TGCCACGAAC AGCAAGCGGA CATGGGACGT
ATCGCGACGT TTAGAGACTG GATGCTGGCT ACTGCGAGAA AAGAACAAGA GGAAGTATTG
GATGAGCCAT TGGATAGCTG A
 
Protein sequence
MSRRLPPLNS LRVFEAAARH LSFTRAAEEL FVTQAAVSHQ IKALEEFLSL KLFRRRNRSL 
LLTEEGQSYF LDIKDIFTSI AEATDKVLER SEKGALTISL PPSFAIQWLV PRLADFNAQE
PDIDVRIKAV DMDEGSLTDD VDVAIYYGRG NWPGLRADKL YQEFLIPLCS PSLLLGNKPL
ESLSDLKLHT LLHDTSRKDW KQFARQQNIE GINVNHGPIF SHSTMVLQAA AHGQGVALGN
NVLAKPEMEA GRLIAPFDEV LVSKNAFYVV CHEQQADMGR IATFRDWMLA TARKEQEEVL
DEPLDS