Gene VIBHAR_01178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01178 
Symbol 
ID5554376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp1196248 
End bp1197696 
Gene Length1449 bp 
Protein Length482 aa 
Translation table11 
GC content46% 
IMG OID640906670 
Productthiamine biosynthesis protein ThiI 
Protein accessionYP_001444395 
Protein GI156973488 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0301] Thiamine biosynthesis ATP pyrophosphatase 
TIGRFAM ID[TIGR00342] thiazole biosynthesis/tRNA modification protein ThiI 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTTA TTGTAAAGCC CCATCCAGAA ATTTTTGTAA AAAGTGAATC TGTGCGTAAG 
CGCTTCACAA AGATTTTAGA GTGCAACATT CGTAACATCG TTAAGAGCCG TACGGAATCT
GTCGCGGTAT TCAACCGTCG TGATCACATT GAAGTGACCT CTGAGAGTGA CGAGTTCCAC
GCTGAAGTTT TAGAAATCCT GACGCACACG CCAGGTATTC GCCACGTCCT TGAAGTAAAG
CAAACCGAAT TCAAAGACTT GCACGATATT TACGAGCAGG TTTTAGAGCT AAGCGGTTCA
CTGATCGAAG GCAAGACCTT CGCTGTGCGC GCAAAGCGTC GTGGTAAACA CGACTTTACT
TCTATTGAGC TAGAGCGTTA CGTAGGTGGC GGTCTTAACC AAGCCGTAGA AAGCGCTCGC
GTTAAGCTCA GCAAGCCGGA TGTAACGATC AACGTTGAAG TAACTAACGA CAGGCTAAAC
CAAGTATTGG CAAGTCACAA AGGCTTAGGT GGTTTCCCAC TAGGTACACA AGAAGACGTA
CTCAGCCTGA TCTCAGGTGG TTTTGATTCT GGTGTTTCAA GCTACCTACA CATCAAACGT
GGCTCTAAAG TGCATTACTG TTTCTTTAAC CTAGGTGGTC CAGCGCACGA AATCGGTGTT
AAGCAGGTTT CTCACTACTT ATGGAACAAA TACGGTTCTT CAGCAAAAGT ACGTTTCATC
TCAGTTGATT TCGAACCGGT AGTGGCTGAA ATCCTGGAGA AAGTTGATGA CGGCCAAATG
GGCGTGATAC TGAAGCGTAT GTTCATGCGT GCCGCAGGCA TGATTGCTCA GAAGATGAAG
ATCGAAGCAT TAGTGACAGG TGAAGCGCTA GGTCAGGTAT CAAGCCAAAC ACTAACTAAC
TTACGCCACA TCGATAACGT AACAGATACT CTTATCCTGC GTCCGCTAAT CAACTGGGAC
AAAGAAGACA TAGTTAACCT AGCGCGTGAA ATCGGCACTG AAGACTTCGC GAAGACAATG
CCAGAATACT GTGGTGTTAT CTCTAAGAAG CCAACTGTGA AAGCGGTGAA AGGCAAGCTC
GAAGCAGAAG AGCAGAAATT CGACTTCAGC ATCCTTGAAC AAGTGGTTCA AGACGCTCGT
ATGACGGACA TCCGTGATAT CGCGAAAGAG TCTAAGCAAG CGGCTCCAGA AGTTGAGCAA
GTACAAGCTG TAGAAGAGCA CGCAATCGTA CTGGATATTC GTAGCCCTGA AGAGGAAGAC
GATAACTCAC TAGAAATCGA TGGCGTTGAA GTAAAACACA TTCCGTTCTA CAAGCTGGGT
ACTCAGTTTG GCGATCTAGA CCAAGCGAAG ACATACCTAC TGTACTGTGA CCGTGGCGTG
ATGAGCCGTC TGCAAGCGCT TTACTTGCAA GAGCAAGGCT TCAACAACGT GAAGGTTTAC
CGCCCTTAA
 
Protein sequence
MKFIVKPHPE IFVKSESVRK RFTKILECNI RNIVKSRTES VAVFNRRDHI EVTSESDEFH 
AEVLEILTHT PGIRHVLEVK QTEFKDLHDI YEQVLELSGS LIEGKTFAVR AKRRGKHDFT
SIELERYVGG GLNQAVESAR VKLSKPDVTI NVEVTNDRLN QVLASHKGLG GFPLGTQEDV
LSLISGGFDS GVSSYLHIKR GSKVHYCFFN LGGPAHEIGV KQVSHYLWNK YGSSAKVRFI
SVDFEPVVAE ILEKVDDGQM GVILKRMFMR AAGMIAQKMK IEALVTGEAL GQVSSQTLTN
LRHIDNVTDT LILRPLINWD KEDIVNLARE IGTEDFAKTM PEYCGVISKK PTVKAVKGKL
EAEEQKFDFS ILEQVVQDAR MTDIRDIAKE SKQAAPEVEQ VQAVEEHAIV LDIRSPEEED
DNSLEIDGVE VKHIPFYKLG TQFGDLDQAK TYLLYCDRGV MSRLQALYLQ EQGFNNVKVY
RP