Gene VIBHAR_01170 details

Gene Information

• Locus tag: VIBHAR_01170
• Symbol: nusB
• ID: 5555330
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio harveyi ATCC BAA-1116
• Kingdom: Bacteria
• Replicon accession: NC_009783
• Strand: +
• Start bp: 1188853
• End bp: 1189320
• Gene Length: 468 bp
• Protein Length: 155 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 640906662
• Product: transcription antitermination protein NusB
• Protein accession: YP_001444387
• Protein GI: 156973480
• COG category: [K] Transcription
• COG ID: [COG0781] Transcription termination factor
• TIGRFAM ID: [TIGR01951] transcription antitermination factor NusB

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGGGCCA GTGTGAAACC AGCCGCACGT CGTAACGCAC GTCAATTCGC GCTACAAGCG 
ATCTACTCAT GGCAAATTAC TAAAGACAAT GTTGCCACGA TCGAAGAACA GTTTTTGTCT 
GGCGACAAAT ACGATGAAGA AGAACTTCAC GCATCTGAGC CTGCACTAGC TGCTCCAGAA 
ACAGACGTAG CTTACTTCCG TGAACTACTA AGCGGTGTTG TACTTAGCCA CTCTGAGCTA 
GATAGCAAAA TCCGTCCATA CGTGTCACGT CCAATGCAGG ACCTAGACAT GATGGAACTT 
GCTCTTCTTC GCCTTGCTAT GTACGAGATG ACTCGTCGCG AAGATGTTCC TTACAAAGTG 
GTAATCAACG AAGCGATTGA ACTTGCAAAA GTATTCGCGG CAGAAGACAG CCACAAATTT 
GTGAATGGTG TGCTAGATAA AGCGGCGCCA CACGTACGTA AGAAATAA 

 

Protein sequence

MGASVKPAAR RNARQFALQA IYSWQITKDN VATIEEQFLS GDKYDEEELH ASEPALAAPE 
TDVAYFRELL SGVVLSHSEL DSKIRPYVSR PMQDLDMMEL ALLRLAMYEM TRREDVPYKV 
VINEAIELAK VFAAEDSHKF VNGVLDKAAP HVRKK