| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_01149 |
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| Symbol | |
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| ID | 5554041 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009783 |
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| Strand | - |
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| Start bp | 1163893 |
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| End bp | 1165497 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640906641 |
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| Product | putative transglycosylase |
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| Protein accession | YP_001444366 |
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| Protein GI | 156973459 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4623] Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAATAA GTCAGTTCAA CCGACTCAAG CGCAGCGCCC TACTTTTCGC CTCTGTGCTT
TTACTCTCTG CCTGTCAGAT TGAGTCGGAA CCCAAAAGTG AATTCGAGCA AATCCAAGAG
CGTGGTGTCC TACGTGTTGG CACGCTAAAC AACCAACTCT CCTACTACAT TGGTCCTGAT
GGTCCTGCTG GCTTGGATTA CGAACTGGCG CGCAAATTTG CAGAGCAACT CGGCGTGAAG
TTGGAAATCA GACCCGCTTT CCGCCAAGCA GAGTTATTCC CTGCTCTGAA AAAAGGCGAT
ATTGATATTA TCGCGACAGG TTTAAACCAA ACCTCTCAAG CGGTTCAACG CTTCCGTCCC
GGGCCTGCTT ACTACTATGT GAGCCAGCAA GTAGTGTACA AAAAAGGCCA GCTTCGCCCT
CGCGATGTAG ACCAGCTCAT CAAGTATCAA GAATCAAAAG ATGAGAAAGC CGGAAACGAA
GACAGCAATG CAGGAGCAGA GACGCTGCAA ATTGTTGAGC AGTCACAATT TGTTCCGACA
TTAACCGCGC TACAGAAAGA ACACCCAGAG CTGCAATTCG AAATTATTGG CGATGCCGAT
ACTCGCGACC TCTTAAAACA CGTATCAACA GGTGAGTTGC GTTTTACAGT AACTGACTCG
GTAGAACTGT CTTTGGCGCA GCGCCTATAC CCAGATTTAG CTTTGGCTTT TGAGCTCACC
GAAGACCAAC CTGTCTCTTG GTTTACTCGT CGTTCTGAAG ATGAAAGCTT GTATGCCATG
TTGATCGAGT TCTTTGGCAA CATTAAACAG TCTGGTGAAC TCGCGACACT CGAAGAGAAA
TACATCGGTC ACATTGAAGC TTTCGACTAC GTAGACACGC GTGCCTTTAT TCGAGCTTTG
GATAACACCC TGCCGAAATG GTCACCACTG TTCCAAAAGT ACAGTGAAGA GTTCGACTGG
CGCTTGATCG CCGCATTGGC TTACCAAGAG TCCCATTGGA AACCAAAAGC AAAATCACCG
ACGGGTGTAC GTGGAATGAT GATGCTTACA TTGCCTACTG CGAAGAGCGT TGGGGTAACG
GACCGACTTG ACCCAGAACA GTCTGTTCGA GGTGGTGTGG AATACCTGCG TCGTATTGTC
GCTCGTGTAC CAGATTCCAT TAATGAACAC GAAAAGATTT GGTTTGCGTT GGCATCTTAC
AACGTTGGCT ATGGTCATAT GATGGACGCA CGACGCCTGA CTAAAGCGCA AGGCGGCGAT
CCAAACGCAT GGGCAGATGT AAAAGAGCGT CTACCATTGT TGCGTCAGAA ACGTTATTAC
AGCCAGACTC GTTACGGTTA TGCCCGTGGT GATGAAGCAC GTAACTACGT AGAAAACATC
CGCCGTTACT ATCAATCGAT CATTGGCCAT GTAAGCCAAA AGCCTGCTAT CGACGAGGAT
ACAGAAGACC TGCAGGTTAT CCCGCCACTC GATCCTAATC TATTAGTTTC TGGTGCTGTG
GAGACCTTGG CTGAACAGGT TTCAGGGGCA GTTGAAGTAA CACCACCACC TGAAGAAAAT
GCGCCTCAAG AAGCAGAGCA AACACCAGTG CCAAAAGCAG AATAA
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| Protein sequence | MQISQFNRLK RSALLFASVL LLSACQIESE PKSEFEQIQE RGVLRVGTLN NQLSYYIGPD
GPAGLDYELA RKFAEQLGVK LEIRPAFRQA ELFPALKKGD IDIIATGLNQ TSQAVQRFRP
GPAYYYVSQQ VVYKKGQLRP RDVDQLIKYQ ESKDEKAGNE DSNAGAETLQ IVEQSQFVPT
LTALQKEHPE LQFEIIGDAD TRDLLKHVST GELRFTVTDS VELSLAQRLY PDLALAFELT
EDQPVSWFTR RSEDESLYAM LIEFFGNIKQ SGELATLEEK YIGHIEAFDY VDTRAFIRAL
DNTLPKWSPL FQKYSEEFDW RLIAALAYQE SHWKPKAKSP TGVRGMMMLT LPTAKSVGVT
DRLDPEQSVR GGVEYLRRIV ARVPDSINEH EKIWFALASY NVGYGHMMDA RRLTKAQGGD
PNAWADVKER LPLLRQKRYY SQTRYGYARG DEARNYVENI RRYYQSIIGH VSQKPAIDED
TEDLQVIPPL DPNLLVSGAV ETLAEQVSGA VEVTPPPEEN APQEAEQTPV PKAE
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