Gene VIBHAR_01137 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01137 
Symbol 
ID5553774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand+ 
Start bp1154095 
End bp1154652 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content45% 
IMG OID640906629 
ProductTfp pilus assembly protein FimT 
Protein accessionYP_001444354 
Protein GI156973447 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4970] Tfp pilus assembly protein FimT 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTACG GCCCTTTTGC CGTTTGCATA GGAATTTGGG AAATGCCTCG CGGGTTTACG 
TTGTTGGAGC TTCTGAACAC CATCGCTGTA ATGAGTGTTT TACTGGTAGC GGCAGCACCA 
TCTTTCCAAA ATGTTTTTGA AACCAAAAAA ATGCAGCGCT TAGCTGATGA GCTACACGGT 
TTTGTTCTTC AGGGTAAGTC GGAAGCGGTT TTACGCAGAG AAAGACTCTG GGCCCACATT 
ATTATGTCTG GGGCTTCATC AAGTGATGGC AATTGGCGAA TAGAACTTAC TGATAACGGA 
GCCGAAGGAG CAGGTACGGT TTTGTTGTCA TTTTCGGGAG AGGCTTACAA CGGAATTGTG 
GTTACGCCAA GTTATTCATC GACTCAAATC AGCTTCGATG ACGTTCATGG TCGCCCTTCC 
GCCGGTAATA TCAAATTTTA TCCGGTAGTA GAATCTACAA AAGCACTCAA ACTCATCTCT 
CACACTCTTT CTGCTCGCGT TCGTGTATGT AGTGATAACA ACAATACCGA GTTCTTTGGG 
TACTCAACCT GCTCTTAA
 
Protein sequence
MNYGPFAVCI GIWEMPRGFT LLELLNTIAV MSVLLVAAAP SFQNVFETKK MQRLADELHG 
FVLQGKSEAV LRRERLWAHI IMSGASSSDG NWRIELTDNG AEGAGTVLLS FSGEAYNGIV 
VTPSYSSTQI SFDDVHGRPS AGNIKFYPVV ESTKALKLIS HTLSARVRVC SDNNNTEFFG 
YSTCS