Gene VIBHAR_01133 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01133 
Symbol 
ID5553584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp1148640 
End bp1149914 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content46% 
IMG OID640906625 
Producthypothetical protein 
Protein accessionYP_001444350 
Protein GI156973443 
COG category[C] Energy production and conversion 
COG ID[COG1301] Na+/H+-dicarboxylate symporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAAAT CGCTTTCTAG TAAGATTTTT ATTGGTTTGT TCGCCGGCCT TGTGCTGGGT 
ACAGCTATTC AGTACTTATT TAGCGGTATT GCGATTTTTG ATACCTATAT CCTAGGTACG
GCAGAAGGGG CAGGCGGCAT GTTCGTTTCG CTGATTAAAC TTCTGGTTGT TCCTTTGGTG
TATGTATCAA TTGTATGTGG CATTGTTGAG CTTAAAGACA TTCGTTCTTT TGGTCGCTTA
GGTGGTAAAA CCTTTACTCT TTACATTCTG AATACCGTCG TTGCGATTAT TGCTGCTCTT
ACTGTTGCTA TGATTGTTCA GCCTGGTGCT GGCGCAAACC TAGCGGGTAC GATTTCTGAC
TCTGTGGCAC TTAAGTCAAC AGAAACGCCG GATATCTTCT CTATGGTTGT GAACATCGTT
CCGAGCAACC CGGTACAGGC GTTTGCAAAT GGCGACATGC TACAGATCAT CTTTATGGCA
ATTCTTACAG GTCTTGCTAT CCAAGCGCTT GATTCAAAAG GCGGCCCTGC GGTTCGTACT
TTTAAGATGG CGAACGAAAT CATGATGAAG CTGATTGGCC TTGTGATGAG CCTTGCGCCA
TACGGTGTAT TCGCTCTGAT GATTCAACTT GGCGCAACAC TGGATGCAGG CACGCTTGCA
TCGGTAGCAG GTTATGTTGC TCTTGTGGTT TCAATGCTGG TGCTTTGGAT CTTCGTTGTA
TACCCACTAG CGGTTCAAAT GTTCACAGGT ATTTCTGCGC GTGAGTTTTC TCGTAAAACA
CGTGAGCAAG TGCTGTTCTC TCTATCTACA GCAAGTTCAA ATGCGACGAT TCCAGTAACG
ATGCGCACTC TTACTGACAA GATTGGTGTG TCTAAGTCGG TAGCTGGTTT TGGTGTACCA
CTGGGCGCTA CGATGAACAT GGCAGGTGCT TCAATCTACA TCGCAATCGC AGCGGTATTC
TGTGCAAATG CATTTGGTCA GCCTATCGCG GTATCTGACC TTGTGACTCT AGGCTTCACT
GTTCTACTAC TGTCTATCGG TGCTGGCGGT GTTCCTGGCG GTGGTGTAGT AATGGTTGGT
GTTATCCTTC ACCAATTGGG TCTACCACCA GAAGGTCTAG CAATTGTTGC TGCGGTTGAC
CGTATTAACG ATATGTTCTG TACATCATCT AACGTAGTCG GCGACACTGC AGTAAACACG
ATTGTTGCTA AGTCTGAAGG CGAGATTGGT AAAGAAGAAA TCGTGGATGC TGAGCCTGCA
CAAGCAAGTG CATAA
 
Protein sequence
MDKSLSSKIF IGLFAGLVLG TAIQYLFSGI AIFDTYILGT AEGAGGMFVS LIKLLVVPLV 
YVSIVCGIVE LKDIRSFGRL GGKTFTLYIL NTVVAIIAAL TVAMIVQPGA GANLAGTISD
SVALKSTETP DIFSMVVNIV PSNPVQAFAN GDMLQIIFMA ILTGLAIQAL DSKGGPAVRT
FKMANEIMMK LIGLVMSLAP YGVFALMIQL GATLDAGTLA SVAGYVALVV SMLVLWIFVV
YPLAVQMFTG ISAREFSRKT REQVLFSLST ASSNATIPVT MRTLTDKIGV SKSVAGFGVP
LGATMNMAGA SIYIAIAAVF CANAFGQPIA VSDLVTLGFT VLLLSIGAGG VPGGGVVMVG
VILHQLGLPP EGLAIVAAVD RINDMFCTSS NVVGDTAVNT IVAKSEGEIG KEEIVDAEPA
QASA