Gene VIBHAR_01124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01124 
SymbolsmpB 
ID5553514 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp1140413 
End bp1140898 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content46% 
IMG OID640906616 
ProductSsrA-binding protein 
Protein accessionYP_001444341 
Protein GI156973434 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0691] tmRNA-binding protein 
TIGRFAM ID[TIGR00086] SsrA-binding protein 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTAAAGA AAAAATCAAA GCAAAAAGCG GGTAGTAACA CTATCGCGCT TAACAAAAAA 
GCTCGCCACG AATACTTCAT TGACGATGAA ATTGAAGCTG GCATGGAGCT ACAAGGCTGG 
GAAGTGAAAG CACTTCGCCA AGGCAAAGCC AACATCGCTG AAAGCTACGT TTTCATGCGT 
GACGGCGAAG CTTTTGTCAG CGGAATGACG ATCACACCTC TTAACCAAGC TTCTACTCAT 
GTTGTCGCAA ACCCTACACG TGTGCGCAAA CTATTGATGA GTCGTCGTGA ACTCGACAAC 
CTTCTTGGTC GCATCAACCG TGAAGGTATG ACGCTAGCCG CGTTGTCACT GTACTGGTCT 
CGCTCTTGGG TAAAGATCAA AATTGGTGTG GCGAAAGGTA AAAAGCTTCA CGACAAACGT 
ACCGATCTTA AAGAAAAAGA TTGGGCTCGT GAAAAAGCGC GCGTAATGAA GAGCTCACTG 
CGTTAA
 
Protein sequence
MVKKKSKQKA GSNTIALNKK ARHEYFIDDE IEAGMELQGW EVKALRQGKA NIAESYVFMR 
DGEAFVSGMT ITPLNQASTH VVANPTRVRK LLMSRRELDN LLGRINREGM TLAALSLYWS 
RSWVKIKIGV AKGKKLHDKR TDLKEKDWAR EKARVMKSSL R